Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.4□□□□□ -1.71
CNOT4O95628 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.4□□□□□ -1.71
CNOT4O95628 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.4□□□□□ -1.71
CNOT4O95628 TPT1P12-201ENST00000448968 492 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 AL118520.1-201ENST00000450770 291 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 MTND1P9-201ENST00000453775 944 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 AC073073.1-201ENST00000493920 463 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 AL139099.1-201ENST00000497398 403 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.4□□□□□ -1.71
CNOT4O95628 RNU2-10P-201ENST00000516375 211 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 RNU6-1088P-201ENST00000516850 104 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.4□□□□□ -1.71
CNOT4O95628 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.4□□□□□ -1.71
CNOT4O95628 RNU6-988P-201ENST00000519081 107 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 HMGB1P41-201ENST00000520234 440 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 AC021006.3-201ENST00000530771 192 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.4□□□□□ -1.71
CNOT4O95628 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.4□□□□□ -1.71
CNOT4O95628 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.4□□□□□ -1.71
CNOT4O95628 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.4□□□□□ -1.71
CNOT4O95628 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.4□□□□□ -1.71
CNOT4O95628 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.4□□□□□ -1.71
CNOT4O95628 SNORD84-203ENST00000584275 78 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.4□□□□□ -1.71
CNOT4O95628 BNIP3P25-201ENST00000596023 559 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 AC008745.1-201ENST00000604064 271 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 uc_338.34-201ENST00000617467 174 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.4□□□□□ -1.71
CNOT4O95628 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CNOT4O95628 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CNOT4O95628 AL359922.3-201ENST00000624779 1670 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CNOT4O95628 AL138713.1-201ENST00000624026 2130 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 MAPK10-320ENST00000641462 6696 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CNOT4O95628 MTND4P14-201ENST00000435799 1354 ntBASIC4.4□□□□□ -1.71
CNOT4O95628 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CNOT4O95628 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.39□□□□□ -1.71
CNOT4O95628 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
CNOT4O95628 AC244517.1-201ENST00000606030 2086 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.39□□□□□ -1.71
CNOT4O95628 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CNOT4O95628 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.39□□□□□ -1.71
CNOT4O95628 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CNOT4O95628 RNU6-511P-201ENST00000363496 107 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 SNORA62-201ENST00000365493 153 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 Y_RNA.401-201ENST00000383965 117 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 RNU6-398P-201ENST00000384143 109 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 RNU6-907P-201ENST00000390924 102 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CNOT4O95628 RPS16P5-201ENST00000406501 404 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 Y_RNA.605-201ENST00000410577 105 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 BX323014.1-201ENST00000412876 237 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.39□□□□□ -1.71
CNOT4O95628 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.39□□□□□ -1.71
CNOT4O95628 DNAJC19P7-201ENST00000428811 344 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.39□□□□□ -1.71
CNOT4O95628 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.39□□□□□ -1.71
CNOT4O95628 AL450023.3-201ENST00000440592 271 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.39□□□□□ -1.71
CNOT4O95628 AL137792.2-201ENST00000443484 235 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.39□□□□□ -1.71
CNOT4O95628 Z95327.1-201ENST00000446082 482 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.39□□□□□ -1.71
CNOT4O95628 SNRPFP3-201ENST00000457792 225 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 snoU109.4-201ENST00000458953 143 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 RN7SL385P-201ENST00000468873 276 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.39□□□□□ -1.71
CNOT4O95628 AC092451.1-201ENST00000480211 153 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 IGLV2-34-201ENST00000490007 283 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 AC025164.1-201ENST00000496249 478 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 Y_RNA.654-201ENST00000497848 106 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.39□□□□□ -1.71
CNOT4O95628 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.39□□□□□ -1.71
CNOT4O95628 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CNOT4O95628 PTP4A1P4-201ENST00000512479 322 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 SMURF2P1-201ENST00000514992 481 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 RNU6-1038P-201ENST00000516516 104 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 IGKV1-32-201ENST00000519290 311 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.39□□□□□ -1.71
CNOT4O95628 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.39□□□□□ -1.71
CNOT4O95628 MTND4P7-201ENST00000523876 130 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 AC012339.2-201ENST00000523996 453 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 OR5D17P-201ENST00000531492 978 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.39□□□□□ -1.71
CNOT4O95628 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.39□□□□□ -1.71
CNOT4O95628 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CNOT4O95628 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.39□□□□□ -1.71
CNOT4O95628 AL121603.1-201ENST00000553815 142 ntBASIC4.39□□□□□ -1.71
CNOT4O95628 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CNOT4O95628 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.39□□□□□ -1.71
CNOT4O95628 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.39□□□□□ -1.71
CNOT4O95628 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CNOT4O95628 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.39□□□□□ -1.71
CNOT4O95628 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CNOT4O95628 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CNOT4O95628 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CNOT4O95628 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.39□□□□□ -1.71
CNOT4O95628 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.38□□□□□ -1.71
CNOT4O95628 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms