Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
RNF40O75150 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF40O75150 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RNF40O75150 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.19□□□□□ -1.42
RNF40O75150 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF40O75150 Y_RNA.324-201ENST00000365165 102 ntBASIC6.19□□□□□ -1.42
RNF40O75150 RPS3AP2-201ENST00000407190 754 ntBASIC6.19□□□□□ -1.42
RNF40O75150 Y_RNA.597-201ENST00000410463 100 ntBASIC6.19□□□□□ -1.42
RNF40O75150 SDHDP6-201ENST00000414693 480 ntBASIC6.19□□□□□ -1.42
RNF40O75150 BX510359.3-201ENST00000422168 306 ntBASIC6.19□□□□□ -1.42
RNF40O75150 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.19□□□□□ -1.42
RNF40O75150 MTCO1P5-201ENST00000433573 344 ntBASIC6.19□□□□□ -1.42
RNF40O75150 AC004938.1-201ENST00000438468 308 ntBASIC6.19□□□□□ -1.42
RNF40O75150 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.19□□□□□ -1.42
RNF40O75150 AC008267.6-201ENST00000441664 139 ntBASIC6.19□□□□□ -1.42
RNF40O75150 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC6.19□□□□□ -1.42
RNF40O75150 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF40O75150 U8.22-201ENST00000459141 133 ntBASIC6.19□□□□□ -1.42
RNF40O75150 AC114982.1-201ENST00000469402 321 ntBASIC6.19□□□□□ -1.42
RNF40O75150 AL122020.1-201ENST00000472287 459 ntBASIC6.19□□□□□ -1.42
RNF40O75150 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.19□□□□□ -1.42
RNF40O75150 AC009120.1-201ENST00000493458 473 ntBASIC6.19□□□□□ -1.42
RNF40O75150 RNA5SP362-201ENST00000516048 118 ntBASIC6.19□□□□□ -1.42
RNF40O75150 RN7SKP288-201ENST00000516227 268 ntBASIC6.19□□□□□ -1.42
RNF40O75150 MIR2355-201ENST00000517199 87 ntBASIC6.19□□□□□ -1.42
RNF40O75150 SNRPGP16-201ENST00000533275 226 ntBASIC6.19□□□□□ -1.42
RNF40O75150 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.19□□□□□ -1.42
RNF40O75150 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF40O75150 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF40O75150 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF40O75150 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF40O75150 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF40O75150 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF40O75150 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF40O75150 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF40O75150 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF40O75150 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF40O75150 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
RNF40O75150 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF40O75150 BTBD10P1-201ENST00000549824 1352 ntBASIC6.18□□□□□ -1.42
RNF40O75150 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RNF40O75150 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.18□□□□□ -1.42
RNF40O75150 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RNF40O75150 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF40O75150 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
RNF40O75150 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
RNF40O75150 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.18□□□□□ -1.42
RNF40O75150 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RNF40O75150 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
RNF40O75150 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF40O75150 RPL9P7-201ENST00000330965 580 ntBASIC6.18□□□□□ -1.42
RNF40O75150 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF40O75150 RNU6-288P-201ENST00000363690 104 ntBASIC6.18□□□□□ -1.42
RNF40O75150 Y_RNA.272-201ENST00000364696 102 ntBASIC6.18□□□□□ -1.42
RNF40O75150 RNU2-61P-201ENST00000411069 191 ntBASIC6.18□□□□□ -1.42
RNF40O75150 RN7SKP293-201ENST00000411389 296 ntBASIC6.18□□□□□ -1.42
RNF40O75150 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.18□□□□□ -1.42
RNF40O75150 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.18□□□□□ -1.42
RNF40O75150 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RNF40O75150 AL591043.1-201ENST00000432461 424 ntBASIC6.18□□□□□ -1.42
RNF40O75150 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.18□□□□□ -1.42
RNF40O75150 AL513043.1-201ENST00000439124 535 ntBASIC6.18□□□□□ -1.42
RNF40O75150 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.18□□□□□ -1.42
RNF40O75150 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RNF40O75150 RNU6-1037P-201ENST00000459571 107 ntBASIC6.18□□□□□ -1.42
RNF40O75150 RPL9P9-202ENST00000466501 579 ntBASIC6.18□□□□□ -1.42
RNF40O75150 AL133445.1-201ENST00000467051 452 ntBASIC6.18□□□□□ -1.42
RNF40O75150 FTH1P24-201ENST00000503502 462 ntBASIC6.18□□□□□ -1.42
RNF40O75150 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC6.18□□□□□ -1.42
RNF40O75150 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC6.18□□□□□ -1.42
RNF40O75150 ATP5LP3-201ENST00000514223 304 ntBASIC6.18□□□□□ -1.42
RNF40O75150 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.18□□□□□ -1.42
RNF40O75150 RPL23AP87-202ENST00000573039 466 ntBASIC6.18□□□□□ -1.42
RNF40O75150 MIR4489-201ENST00000578869 62 ntBASIC6.18□□□□□ -1.42
RNF40O75150 MIR3176-201ENST00000582210 90 ntBASIC6.18□□□□□ -1.42
RNF40O75150 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.18□□□□□ -1.42
RNF40O75150 AL136131.3-201ENST00000607600 188 ntBASIC6.18□□□□□ -1.42
RNF40O75150 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.18□□□□□ -1.42
RNF40O75150 MIR8076-201ENST00000611401 83 ntBASIC6.18□□□□□ -1.42
RNF40O75150 RMST_4.1-201ENST00000616886 107 ntBASIC6.18□□□□□ -1.42
RNF40O75150 MIR6130-201ENST00000619419 109 ntBASIC6.18□□□□□ -1.42
RNF40O75150 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC6.18□□□□□ -1.42
RNF40O75150 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RNF40O75150 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
RNF40O75150 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.18□□□□□ -1.42
RNF40O75150 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF40O75150 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF40O75150 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF40O75150 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.18□□□□□ -1.42
RNF40O75150 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RNF40O75150 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RNF40O75150 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RNF40O75150 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
RNF40O75150 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF40O75150 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RNF40O75150 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RNF40O75150 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.17□□□□□ -1.42
RNF40O75150 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RNF40O75150 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RNF40O75150 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms