Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 Y_RNA.404-201ENST00000383978 102 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 RNU6-214P-201ENST00000384130 107 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 MT-TG-201ENST00000387429 68 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 RPL21P67-201ENST00000402896 478 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 RN7SKP16-201ENST00000410180 299 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 RNU4-78P-201ENST00000410940 126 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 AL732292.1-201ENST00000426692 226 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 RNU6-953P-201ENST00000459154 107 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 RPL5P30-201ENST00000465511 891 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 AC096745.1-201ENST00000509945 370 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 RN7SKP122-201ENST00000515923 296 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 RNU6-307P-201ENST00000516743 106 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 RN7SKP60-201ENST00000516985 239 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 AL049839.1-201ENST00000556151 657 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 AC073539.2-201ENST00000597113 165 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 AC010680.4-201ENST00000605334 543 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 AL450472.3-201ENST00000615578 367 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 MIR6830-201ENST00000636015 70 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 AC004817.4-201ENST00000602396 3625 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 AC063976.2-201ENST00000425667 3556 ntBASIC5.86□□□□□ -1.47
USP17L3A6NCW0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
USP17L3A6NCW0 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 EIF2AP4-201ENST00000424793 1781 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 SNORD62.1-201ENST00000362541 86 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 SNORA70E-201ENST00000384492 135 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 RNU6-95P-201ENST00000384697 107 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 RPS4XP7-201ENST00000406274 780 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 HMGB3P2-201ENST00000411913 584 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 AC080125.1-201ENST00000414888 684 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 AC114482.1-201ENST00000418010 247 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 REREP1Y-201ENST00000422655 198 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 MRPS21P2-201ENST00000424704 264 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 USMG5P1-201ENST00000425964 177 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 HIGD1AP11-201ENST00000438361 280 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 REREP2Y-201ENST00000439103 200 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 RPL7L1P1-201ENST00000448259 785 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 MRPS35P2-201ENST00000508242 191 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 RNU6-470P-201ENST00000515954 104 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 AL121932.1-201ENST00000605542 214 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 AC004696.1-201ENST00000614345 607 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 AC074029.4-201ENST00000624796 1859 ntBASIC5.85□□□□□ -1.47
USP17L3A6NCW0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP17L3A6NCW0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L3A6NCW0 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.84□□□□□ -1.47
USP17L3A6NCW0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.84□□□□□ -1.47
USP17L3A6NCW0 HSPA8P4-201ENST00000511877 1920 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.84□□□□□ -1.47
USP17L3A6NCW0 SNORA73.1-201ENST00000363107 205 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 RNA5SP447-201ENST00000363749 119 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP17L3A6NCW0 Y_RNA.455-201ENST00000384230 98 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 SNORD3H-201ENST00000384486 214 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 RNU6-817P-201ENST00000391083 104 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 RNA5SP397-201ENST00000391323 118 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 RNU2-43P-201ENST00000410306 190 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 Z99755.1-201ENST00000414048 380 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 AC092809.3-201ENST00000415453 231 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 NUP35P1-201ENST00000422734 947 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 AC008267.5-201ENST00000424928 265 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.84□□□□□ -1.47
USP17L3A6NCW0 GSTA11P-201ENST00000452866 669 ntBASIC5.84□□□□□ -1.47
USP17L3A6NCW0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.84□□□□□ -1.47
USP17L3A6NCW0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms