Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC114774.1-201ENST00000507410 1770 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 AL159987.1-201ENST00000347911 293 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 RNA5SP453-201ENST00000362503 119 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 RNU6-774P-201ENST00000363238 107 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 RNU6-1317P-201ENST00000364582 104 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 RNU6-76P-201ENST00000384060 104 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 RNU6-708P-201ENST00000384217 107 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 AC113412.1-201ENST00000425840 504 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 RPL23AP25-201ENST00000430973 463 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 snoU13.3-201ENST00000459441 104 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 RPS23P6-201ENST00000466136 431 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 RNU1-86P-201ENST00000516108 154 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 RNU1-107P-201ENST00000516617 154 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 FKBP1BP1-201ENST00000553366 325 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 AC005951.2-201ENST00000576282 495 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 MIR3910-1-201ENST00000580936 111 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PCDHB11Q9Y5F2 Z75746.1-201ENST00000440243 2080 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 C4BPAP1-201ENST00000415474 1893 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 RNA5SP52-201ENST00000362448 134 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 RNU6-1249P-201ENST00000363237 111 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 MIR130A-201ENST00000385274 89 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 AF186996.5-201ENST00000418098 904 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 GAPDHP58-201ENST00000438477 1006 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 RN7SL72P-201ENST00000460697 269 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 AC108161.1-201ENST00000461060 402 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 AC007686.1-201ENST00000488511 463 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 DUTP1-201ENST00000493631 470 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 SUMO2P6-201ENST00000505273 288 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 GLUD1P3-202ENST00000508551 200 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 HMGN1P11-201ENST00000508668 303 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 OR51K1P-201ENST00000510214 950 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 IGKV2-23-201ENST00000518729 323 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 AC034102.8-201ENST00000615146 484 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 AC018445.2-201ENST00000622987 260 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 BCORP1-203ENST00000513194 5093 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 AC097063.1-201ENST00000426714 1797 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 AC140134.1-201ENST00000511830 3544 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 DDX18P3-201ENST00000404856 2007 ntBASIC5.52□□□□□ -1.53
PCDHB11Q9Y5F2 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 RPL9P7-201ENST00000330965 580 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 Y_RNA.27-201ENST00000362540 103 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 RNA5SP319-201ENST00000362768 119 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 RNU6-662P-201ENST00000384253 104 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 MIR215-201ENST00000384858 110 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 AL603910.2-201ENST00000407268 136 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 AL451062.2-201ENST00000427515 271 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 BX276092.6-201ENST00000430476 250 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 USP9YP7-201ENST00000436723 430 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 AL513043.1-201ENST00000439124 535 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 AC073587.1-201ENST00000447093 876 ntBASIC5.51□□□□□ -1.53
PCDHB11Q9Y5F2 USP9YP32-201ENST00000452432 430 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms