Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 Y_RNA.441-201ENST00000384123 112 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 RNU6-225P-201ENST00000384613 103 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 AL591034.2-201ENST00000402839 359 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 MTCYBP2-201ENST00000407745 171 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 RN7SKP159-201ENST00000410657 292 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 VTI1BP4-201ENST00000427516 527 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 AC006946.1-201ENST00000429106 328 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 EZH2P1-201ENST00000431167 291 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 RPS17P13-201ENST00000448974 407 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 RPL31P60-201ENST00000478450 367 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 AC091912.1-201ENST00000511351 248 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 RNU6-496P-201ENST00000516145 99 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 AC100870.1-201ENST00000522035 505 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 RNU6-85P-201ENST00000605989 107 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 MIR6133-201ENST00000617057 108 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 AC243829.7-201ENST00000633081 225 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 MIR4679-1-201ENST00000637619 75 ntBASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HPS5Q9UPZ3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 RN7SKP104-201ENST00000362605 328 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 SNORD113-8-201ENST00000363497 74 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 SNORA67-201ENST00000384423 137 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 RNU6-45P-201ENST00000384471 107 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 RNU6-102P-201ENST00000384485 104 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 RNA5SP339-201ENST00000390987 122 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 Y_RNA.580-201ENST00000391004 95 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 EI24P4-201ENST00000423683 1078 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 AL159987.2-201ENST00000432754 307 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 BX679664.1-201ENST00000434429 253 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 AC091179.1-201ENST00000461606 579 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 RPL9P9-202ENST00000466501 579 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 AC069113.1-201ENST00000517763 267 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 ERHP1-201ENST00000523006 310 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 AC005951.2-201ENST00000576282 495 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 AC012616.1-201ENST00000600294 197 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 AL162424.1-201ENST00000602325 221 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 AP000769.2-201ENST00000602344 396 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 RNU6-84P-201ENST00000607737 102 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 AL139124.1-201ENST00000609123 421 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 AC144833.1-201ENST00000567953 4089 ntBASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
HPS5Q9UPZ3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 RN7SKP145-201ENST00000363291 303 ntBASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 RNU6-325P-201ENST00000411132 105 ntBASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 RPL17P36-201ENST00000420302 549 ntBASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 TMEM167AP1-201ENST00000423409 219 ntBASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 AC008264.1-201ENST00000447612 367 ntBASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 AP001324.2-201ENST00000461163 319 ntBASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 HMGN2P13-201ENST00000476476 274 ntBASIC6.44□□□□□ -1.38
HPS5Q9UPZ3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms