Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 AL451074.3-201ENST00000437709 472 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 AL138799.3-201ENST00000438968 350 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 RPS4XP4-201ENST00000443195 763 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 AC079448.1-201ENST00000449377 373 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 MTND3P10-201ENST00000450967 341 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 MTND2P24-201ENST00000453434 806 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 MTND1P9-201ENST00000453775 944 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 AC104308.1-201ENST00000454621 333 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 RPS27AP13-201ENST00000498403 237 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
USP25Q9UHP3 AC009646.1-201ENST00000510455 318 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
USP25Q9UHP3 AC114781.4-201ENST00000513707 639 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
USP25Q9UHP3 RNU2-58P-201ENST00000516403 183 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 Y_RNA.702-201ENST00000516843 96 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 RNU2-46P-201ENST00000517038 113 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 AL157687.1-201ENST00000554853 619 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 AL157394.1-201ENST00000562983 1224 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 HMGN1P30-201ENST00000589286 268 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 BNIP3P33-201ENST00000598912 569 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 AP000907.4-201ENST00000604143 237 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 AC114781.5-201ENST00000615297 108 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 AC104985.2-201ENST00000620598 500 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 AC079597.1-201ENST00000624306 508 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP25Q9UHP3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP25Q9UHP3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USP25Q9UHP3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 USP8P1-201ENST00000494673 3183 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
USP25Q9UHP3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 SNORA72.1-201ENST00000363485 129 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 RNY4P34-201ENST00000364779 95 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP25Q9UHP3 U3.20-201ENST00000390909 217 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 U3.22-201ENST00000391120 215 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 RPS20P2-201ENST00000402520 389 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 RPL7P25-201ENST00000404151 721 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 AC138393.2-201ENST00000414742 246 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 AL358934.1-201ENST00000432346 324 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 AC099563.1-201ENST00000456086 418 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 UQCRHP4-201ENST00000471686 272 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 SNORA70.14-201ENST00000516205 110 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 AP003497.1-201ENST00000528472 562 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 OR5D17P-201ENST00000531492 978 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 CBX3P7-201ENST00000532876 502 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 AK6P1-201ENST00000540219 478 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 CKS1BP3-201ENST00000600888 237 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 AC245014.2-201ENST00000603689 287 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 AL049634.3-201ENST00000604968 457 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 AC246785.4-201ENST00000605374 287 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 AC015967.1-201ENST00000619893 476 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 AC110994.2-201ENST00000635481 492 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 LRRC77P-213ENST00000637727 880 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP25Q9UHP3 MAPK10-372ENST00000641954 3413 ntBASIC4.54□□□□□ -1.68
USP25Q9UHP3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP25Q9UHP3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
USP25Q9UHP3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms