Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AL161729.4-201ENST00000604650 476 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AL391261.4-201ENST00000616012 481 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC138649.3-201ENST00000622154 254 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 PISRT1-201ENST00000626175 531 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 MIR4275-201ENST00000636486 87 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 AC032011.1-201ENST00000611703 1549 ntBASIC4.15□□□□□ -1.75
VPS45Q9NRW7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS45Q9NRW7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 Y_RNA.46-201ENST00000362695 102 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 SNORA73.2-201ENST00000364946 201 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 RNU1-89P-201ENST00000384592 164 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 RPL7P25-201ENST00000404151 721 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 RNU4-6P-201ENST00000410804 122 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 SNORA57.3-201ENST00000411095 141 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 ISCA1P1-201ENST00000426679 387 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 AC009961.2-201ENST00000435771 251 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 RPL17P49-201ENST00000443728 411 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 snoU13.4-201ENST00000458916 104 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 RPS3AP17-201ENST00000472594 777 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 AC022483.1-201ENST00000514020 567 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 CCNG2P1-201ENST00000549521 1000 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 CKS1BP3-201ENST00000600888 237 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 AC073534.2-201ENST00000620377 381 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 AC118273.1-201ENST00000525324 3006 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 MARK2P15-201ENST00000432204 2186 ntBASIC4.14□□□□□ -1.75
VPS45Q9NRW7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS45Q9NRW7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AC002546.1-201ENST00000588041 2504 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 FRG1BP-201ENST00000278882 761 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 RNU6-97P-201ENST00000363387 104 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 RNU6-1074P-201ENST00000383995 104 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AL138878.1-201ENST00000405131 347 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AL358472.1-201ENST00000431295 329 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AC004866.2-201ENST00000438285 481 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AP1S2P1-201ENST00000457344 379 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AC004924.1-201ENST00000480160 781 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 RPL9P6-201ENST00000492764 598 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AP003122.4-201ENST00000530980 758 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AC034268.2-201ENST00000571784 482 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 NRBF2P1-201ENST00000587407 859 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 HMGN1P30-201ENST00000589286 268 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AC011468.4-201ENST00000603942 409 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 RNU6-87P-201ENST00000607561 108 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 AC110994.2-201ENST00000635481 492 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 OR5H6-203ENST00000642105 978 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 TAB3P1-202ENST00000452645 1634 ntBASIC4.13□□□□□ -1.75
VPS45Q9NRW7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
VPS45Q9NRW7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.12□□□□□ -1.75
VPS45Q9NRW7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms