Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 SNORD56.5-201ENST00000364281 72 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 RNU6-1180P-201ENST00000364935 107 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AL031679.1-201ENST00000400616 525 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 USP9YP21-201ENST00000420603 432 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AC007435.1-201ENST00000421086 415 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AL139281.1-201ENST00000422120 335 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 NDUFB4P7-201ENST00000423198 363 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 HMGN1P5-201ENST00000448591 263 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 MTND4LP3-201ENST00000468320 276 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 RPL23AP11-201ENST00000475260 469 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 RN7SL499P-201ENST00000481141 276 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 RPS27P26-201ENST00000494583 239 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 RPL21P131-201ENST00000497298 483 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 HMGB1P28-201ENST00000507778 552 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 RNA5SP341-201ENST00000516261 117 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 RNU6-1225P-201ENST00000516336 65 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 SCARNA13-201ENST00000516672 275 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AP000857.1-201ENST00000532151 543 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 HIGD1AP17-201ENST00000554576 276 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AMZ2P1-203ENST00000565833 850 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 MIR5195-201ENST00000583555 115 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AC013553.2-201ENST00000604244 589 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AC019159.1-201ENST00000605094 187 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 RPL21P136-201ENST00000605378 396 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AL390208.1-201ENST00000605885 644 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AC004067.1-201ENST00000608733 700 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AC073308.1-201ENST00000623696 305 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AP003485.1-201ENST00000625093 753 ntBASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.88□□□□□ -1.95
LRRC40Q9H9A6 AL672167.1-206ENST00000356293 943 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 RNU6-1035P-201ENST00000384477 107 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AL590004.2-201ENST00000404787 371 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 SPA17P1-201ENST00000416656 452 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 MTND4P3-201ENST00000417829 541 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 MRPS36P1-201ENST00000421291 307 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC018630.2-202ENST00000422992 927 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AL139421.1-201ENST00000423010 169 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AL451062.2-201ENST00000427515 271 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AL512844.2-201ENST00000433990 593 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 RPS20P5-201ENST00000434808 360 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AL513043.1-201ENST00000439124 535 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 MTND2P20-201ENST00000440805 661 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 TRGVB-201ENST00000453257 471 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 MTND2P24-201ENST00000453434 806 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC008427.1-201ENST00000503102 655 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC016550.1-201ENST00000505348 785 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC117522.3-201ENST00000507974 584 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 TTC39CP1-201ENST00000512513 755 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC093677.1-201ENST00000514414 678 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 SNORA9.3-201ENST00000516383 129 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 SLC2A13P1-201ENST00000531560 322 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC128657.1-201ENST00000549459 145 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 SETP2-201ENST00000553886 926 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC126365.2-201ENST00000580630 379 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 MIR3605-201ENST00000583214 100 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC012468.1-201ENST00000604888 430 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC069304.2-201ENST00000605154 435 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 BNIP3P19-201ENST00000605397 577 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AL627309.6-201ENST00000606857 840 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC107871.2-201ENST00000612894 502 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC004852.3-201ENST00000614131 326 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AL162274.2-201ENST00000614406 332 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC005539.1-201ENST00000443768 1479 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC073346.2-201ENST00000624724 2058 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AC008669.1-201ENST00000565823 2178 ntBASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LRRC40Q9H9A6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LRRC40Q9H9A6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
LRRC40Q9H9A6 AC092593.1-201ENST00000515413 1815 ntBASIC2.86□□□□□ -1.95
LRRC40Q9H9A6 AC026241.1-201ENST00000517873 2142 ntBASIC2.86□□□□□ -1.95
LRRC40Q9H9A6 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LRRC40Q9H9A6 MIR26A1-201ENST00000362205 77 ntBASIC2.86□□□□□ -1.95
LRRC40Q9H9A6 RNU1-105P-201ENST00000363470 161 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms