Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CDT1Q9H211 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDT1Q9H211 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CDT1Q9H211 AC073073.2-201ENST00000609827 2578 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CDT1Q9H211 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.84□□□□□ -1.79
CDT1Q9H211 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDT1Q9H211 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.84□□□□□ -1.79
CDT1Q9H211 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDT1Q9H211 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CDT1Q9H211 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDT1Q9H211 FRG1CP-201ENST00000358464 769 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 SNORA63.1-201ENST00000362493 131 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 RNA5SP387-201ENST00000364226 106 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 RNU6-853P-201ENST00000364306 107 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 RNU6-533P-201ENST00000384144 107 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 AL356421.1-201ENST00000403255 413 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 MIR1250-201ENST00000408098 113 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 RNA5SP56-201ENST00000410277 118 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.84□□□□□ -1.79
CDT1Q9H211 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.84□□□□□ -1.79
CDT1Q9H211 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.84□□□□□ -1.79
CDT1Q9H211 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.84□□□□□ -1.79
CDT1Q9H211 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.84□□□□□ -1.79
CDT1Q9H211 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDT1Q9H211 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.84□□□□□ -1.79
CDT1Q9H211 PRDX3P3-201ENST00000447765 522 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 AL590365.1-201ENST00000450788 243 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 ANP32BP2-201ENST00000454525 545 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 AC025518.1-201ENST00000479856 347 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDT1Q9H211 TXNP6-201ENST00000510190 310 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CDT1Q9H211 OR4P1P-201ENST00000530808 1136 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.84□□□□□ -1.79
CDT1Q9H211 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.84□□□□□ -1.79
CDT1Q9H211 AC107016.1-201ENST00000550463 337 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.84□□□□□ -1.79
CDT1Q9H211 AP005205.1-201ENST00000563503 508 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.84□□□□□ -1.79
CDT1Q9H211 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.84□□□□□ -1.79
CDT1Q9H211 AL606834.2-201ENST00000602954 668 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 AC091965.4-201ENST00000607691 587 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.84□□□□□ -1.79
CDT1Q9H211 MIR7851-201ENST00000610611 160 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 AL596245.1-201ENST00000618994 362 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.84□□□□□ -1.79
CDT1Q9H211 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CDT1Q9H211 AC099654.13-201ENST00000639774 207 ntBASIC3.84□□□□□ -1.79
CDT1Q9H211 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.84□□□□□ -1.79
CDT1Q9H211 CCT4P2-201ENST00000233836 1548 ntBASIC3.84□□□□□ -1.8
CDT1Q9H211 MTCO1P12-201ENST00000414273 1543 ntBASIC3.84□□□□□ -1.8
CDT1Q9H211 AL049781.1-201ENST00000623195 3585 ntBASIC3.84□□□□□ -1.8
CDT1Q9H211 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CDT1Q9H211 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.84□□□□□ -1.8
CDT1Q9H211 AC008725.1-201ENST00000605123 2263 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDT1Q9H211 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.83□□□□□ -1.8
CDT1Q9H211 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDT1Q9H211 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDT1Q9H211 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
CDT1Q9H211 MIR208A-201ENST00000362287 71 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 RNU4-35P-201ENST00000362588 141 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 RNA5SP322-201ENST00000363617 119 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 Y_RNA.234-201ENST00000364409 97 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 RNU6-867P-201ENST00000364956 107 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.83□□□□□ -1.8
CDT1Q9H211 RNU4-78P-201ENST00000410940 126 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 HMGB3P23-201ENST00000414981 585 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 RPL30P16-201ENST00000419341 429 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 RPL21P32-201ENST00000419877 477 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.83□□□□□ -1.8
CDT1Q9H211 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.83□□□□□ -1.8
CDT1Q9H211 SKP1P1-201ENST00000438081 489 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.83□□□□□ -1.8
CDT1Q9H211 AC244505.5-201ENST00000443639 207 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 FAM103A2P-201ENST00000444122 354 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDT1Q9H211 USP9YP12-201ENST00000450481 570 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 SNORD42A-201ENST00000459584 64 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 AC078817.1-201ENST00000492623 435 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 AL358832.1-201ENST00000497800 389 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.83□□□□□ -1.8
CDT1Q9H211 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDT1Q9H211 COX7A2P2-201ENST00000505291 250 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.83□□□□□ -1.8
CDT1Q9H211 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.83□□□□□ -1.8
CDT1Q9H211 RN7SKP116-201ENST00000516902 319 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 RNU6-714P-201ENST00000516963 103 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.83□□□□□ -1.8
CDT1Q9H211 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CDT1Q9H211 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.83□□□□□ -1.8
CDT1Q9H211 AC090615.1-201ENST00000577519 154 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.83□□□□□ -1.8
CDT1Q9H211 AL669831.4-202ENST00000590817 238 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 TPMTP1-201ENST00000592307 737 ntBASIC3.83□□□□□ -1.8
CDT1Q9H211 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms