Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 SET-203ENST00000372688 801 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 RNU6-946P-201ENST00000383878 107 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 AC009804.1-201ENST00000400949 179 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 NDUFS5P1-201ENST00000405668 289 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 RNU6-1050P-201ENST00000410388 107 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 FAR2P4-202ENST00000425399 584 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 AC093106.2-201ENST00000428212 385 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 GAPDHP58-201ENST00000438477 1006 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 CYCSP24-201ENST00000445119 316 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 RNU7-167P-201ENST00000459160 62 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 RPS4XP1-201ENST00000482189 787 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 AC110794.1-201ENST00000505816 425 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 RBBP4P6-201ENST00000508098 202 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 AC116655.1-201ENST00000508324 901 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 RNU6-1069P-201ENST00000516612 133 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 GNAI2P1-201ENST00000541815 315 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 NUTF2P8-201ENST00000604593 363 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 AL670379.4-201ENST00000605279 254 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 AC018462.2-201ENST00000605375 395 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 AC109780.1-201ENST00000451768 1344 ntBASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TRIM56Q9BRZ2 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 NEAT1-202ENST00000501122 22743 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 RNU6-434P-201ENST00000384376 107 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 RNU6-393P-201ENST00000384475 107 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 DPH3P2-201ENST00000422618 250 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 BX323845.1-201ENST00000432417 179 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 RPS11P7-201ENST00000442125 465 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 GSTA11P-201ENST00000452866 669 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 AC092451.1-201ENST00000480211 153 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 RN7SL30P-201ENST00000488416 306 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 AC026801.1-201ENST00000497178 464 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 NDUFB5P1-201ENST00000508134 564 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 TBCAP3-201ENST00000512475 312 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 AC026782.1-201ENST00000512952 449 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 Y_RNA.721-201ENST00000517207 102 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 AC044860.2-201ENST00000561005 179 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 AC069307.1-201ENST00000602820 447 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 AL512329.2-201ENST00000607350 548 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 AL589994.2-201ENST00000621124 579 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 AC243312.2-201ENST00000623340 601 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 C4BPAP1-201ENST00000415474 1893 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 AL731566.1-201ENST00000620490 1937 ntBASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
TRIM56Q9BRZ2 AC104260.2-201ENST00000623551 3497 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 MAPK10-304ENST00000641341 3984 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 RNU6-99P-201ENST00000364721 107 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 RNU1-115P-201ENST00000365329 160 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 SMIM11P1-201ENST00000369586 178 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms