Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RPL21P93-201ENST00000480465 489 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 AC233702.1-201ENST00000482905 502 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 AC087190.1-201ENST00000484462 480 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 AC093591.1-201ENST00000491435 481 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 RPS27P26-201ENST00000494583 239 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 RPL21P16-201ENST00000495531 483 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
VMP1Q96GC9 AC114967.1-201ENST00000504890 259 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 AC119751.4-201ENST00000507498 357 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 AC093281.2-201ENST00000510153 597 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.31□□□□□ -1.88
VMP1Q96GC9 AC034159.1-201ENST00000513885 583 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 RNA5SP216-201ENST00000516111 123 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.31□□□□□ -1.88
VMP1Q96GC9 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.31□□□□□ -1.88
VMP1Q96GC9 HSPE1P20-201ENST00000538133 289 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 TRAV28-201ENST00000557548 323 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 AC005951.2-201ENST00000576282 495 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 BNIP3P33-201ENST00000598912 569 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 BNIP3P38-201ENST00000601117 544 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 AL161729.4-201ENST00000604650 476 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 AL139344.1-201ENST00000605228 195 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 AC110801.1-201ENST00000623590 212 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.31□□□□□ -1.88
VMP1Q96GC9 AC099063.3-201ENST00000642066 185 ntBASIC3.31□□□□□ -1.88
VMP1Q96GC9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VMP1Q96GC9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VMP1Q96GC9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
VMP1Q96GC9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VMP1Q96GC9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
VMP1Q96GC9 RNU6-777P-201ENST00000364265 104 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 SNORD56.5-201ENST00000364281 72 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VMP1Q96GC9 RNU1-39P-201ENST00000383897 165 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 RNU6-432P-201ENST00000384196 109 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 TXNP7-201ENST00000406296 293 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 U3.39-201ENST00000408569 239 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.3□□□□□ -1.88
VMP1Q96GC9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.3□□□□□ -1.88
VMP1Q96GC9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.3□□□□□ -1.88
VMP1Q96GC9 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.3□□□□□ -1.88
VMP1Q96GC9 AL049734.2-201ENST00000441066 616 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 PIGFP3-201ENST00000441918 722 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 AC135721.1-201ENST00000497954 479 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 UBE2V1P12-201ENST00000503954 474 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.3□□□□□ -1.88
VMP1Q96GC9 FABP5P12-201ENST00000515543 389 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 SNORA70.18-201ENST00000516696 98 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 AC104027.1-201ENST00000521887 300 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 MTCO1P47-201ENST00000523889 1271 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 AL133271.1-201ENST00000538229 291 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
VMP1Q96GC9 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VMP1Q96GC9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
VMP1Q96GC9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.3□□□□□ -1.88
VMP1Q96GC9 AC010620.2-201ENST00000600135 313 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 AL357094.1-201ENST00000603845 844 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 AC080013.3-201ENST00000606839 578 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 AC097478.2-201ENST00000610572 514 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
VMP1Q96GC9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.3□□□□□ -1.88
VMP1Q96GC9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VMP1Q96GC9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
VMP1Q96GC9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VMP1Q96GC9 AC068647.1-201ENST00000489539 2265 ntBASIC3.3□□□□□ -1.88
VMP1Q96GC9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VMP1Q96GC9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
VMP1Q96GC9 MIR148B-201ENST00000362252 99 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 SNORA71.3-201ENST00000362582 128 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 RNU6-462P-201ENST00000362659 105 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 RNU6-853P-201ENST00000364306 107 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 RN7SKP140-201ENST00000411196 284 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.29□□□□□ -1.88
VMP1Q96GC9 SDCBPP3-201ENST00000419629 891 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 AC091390.3-201ENST00000426478 338 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 AC007919.1-201ENST00000429380 217 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 YME1L1P1-201ENST00000429435 297 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 YWHAZP7-201ENST00000436906 631 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 RPL21P2-201ENST00000440049 481 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 UBBP3-201ENST00000445497 241 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 AL162389.1-201ENST00000449233 177 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.29□□□□□ -1.88
VMP1Q96GC9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.29□□□□□ -1.88
VMP1Q96GC9 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.29□□□□□ -1.88
VMP1Q96GC9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.29□□□□□ -1.88
VMP1Q96GC9 RNU2-27P-201ENST00000516185 142 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 NRON-201ENST00000517270 370 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.29□□□□□ -1.88
VMP1Q96GC9 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.29□□□□□ -1.88
VMP1Q96GC9 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.29□□□□□ -1.88
VMP1Q96GC9 AL035413.2-201ENST00000604801 525 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 AL136363.1-201ENST00000605349 337 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VMP1Q96GC9 TUG1_2.1-201ENST00000614234 87 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 AC004696.1-201ENST00000614345 607 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 AC010133.1-201ENST00000615809 842 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 AC022149.2-201ENST00000621061 203 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 AL357559.1-201ENST00000622228 274 ntBASIC3.29□□□□□ -1.88
VMP1Q96GC9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms