Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.8□□□□□ -1.8
SKA1Q96BD8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.8□□□□□ -1.8
SKA1Q96BD8 AC007038.2-201ENST00000608095 740 ntBASIC3.8□□□□□ -1.8
SKA1Q96BD8 AC107214.2-201ENST00000608204 634 ntBASIC3.8□□□□□ -1.8
SKA1Q96BD8 RMST_8.1-201ENST00000610287 165 ntBASIC3.8□□□□□ -1.8
SKA1Q96BD8 AC087683.2-201ENST00000611384 326 ntBASIC3.8□□□□□ -1.8
SKA1Q96BD8 RNVU1-4-201ENST00000612985 164 ntBASIC3.8□□□□□ -1.8
SKA1Q96BD8 SDR42E1P2-201ENST00000614861 481 ntBASIC3.8□□□□□ -1.8
SKA1Q96BD8 AP003122.6-201ENST00000623831 495 ntBASIC3.8□□□□□ -1.8
SKA1Q96BD8 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.8□□□□□ -1.8
SKA1Q96BD8 OR5H6-203ENST00000642105 978 ntBASIC3.8□□□□□ -1.8
SKA1Q96BD8 CCT4P2-201ENST00000233836 1548 ntBASIC3.8□□□□□ -1.8
SKA1Q96BD8 RIOK3P1-201ENST00000418778 1528 ntBASIC3.8□□□□□ -1.8
SKA1Q96BD8 ZNF826P-207ENST00000622273 1910 ntBASIC3.8□□□□□ -1.8
SKA1Q96BD8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SKA1Q96BD8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.79□□□□□ -1.8
SKA1Q96BD8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SKA1Q96BD8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SKA1Q96BD8 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.79□□□□□ -1.8
SKA1Q96BD8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SKA1Q96BD8 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.79□□□□□ -1.8
SKA1Q96BD8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SKA1Q96BD8 MIR208A-201ENST00000362287 71 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 RNU6-525P-201ENST00000363685 104 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 MIR218-2-201ENST00000385006 110 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SKA1Q96BD8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.79□□□□□ -1.8
SKA1Q96BD8 HMGN2P31-201ENST00000432430 273 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 AL512844.2-201ENST00000433990 593 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 MTND5P2-201ENST00000442927 1142 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 MTCO3P45-201ENST00000443036 613 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 RPS3AP12-201ENST00000443616 753 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 RNU7-59P-201ENST00000459101 61 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 AC004801.2-202ENST00000463559 283 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 RPL21P8-201ENST00000465083 535 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.79□□□□□ -1.8
SKA1Q96BD8 MTND4LP22-201ENST00000508209 276 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.79□□□□□ -1.8
SKA1Q96BD8 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.79□□□□□ -1.8
SKA1Q96BD8 TTC39CP1-201ENST00000512513 755 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 RNU6-1282P-201ENST00000516735 96 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 RNA5SP291-201ENST00000517222 105 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SKA1Q96BD8 AP000907.2-201ENST00000530827 353 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.79□□□□□ -1.8
SKA1Q96BD8 AC007954.1-201ENST00000554198 494 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 MIR4738-201ENST00000579134 87 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.79□□□□□ -1.8
SKA1Q96BD8 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.79□□□□□ -1.8
SKA1Q96BD8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.79□□□□□ -1.8
SKA1Q96BD8 AC008751.2-201ENST00000597885 980 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 PRELID3BP8-201ENST00000604148 295 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 AC131159.1-201ENST00000621854 213 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 AC007671.2-201ENST00000637344 619 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SKA1Q96BD8 AC007785.2-201ENST00000598627 1916 ntBASIC3.79□□□□□ -1.8
SKA1Q96BD8 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SKA1Q96BD8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SKA1Q96BD8 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.79□□□□□ -1.8
SKA1Q96BD8 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.79□□□□□ -1.8
SKA1Q96BD8 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SKA1Q96BD8 CEP170P1-201ENST00000502249 4587 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.78□□□□□ -1.8
SKA1Q96BD8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SKA1Q96BD8 AL049641.1-201ENST00000441055 1948 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SKA1Q96BD8 RNU6-660P-201ENST00000364566 109 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 RNU6-741P-201ENST00000383889 107 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 RNA5SP252-201ENST00000391131 119 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.78□□□□□ -1.8
SKA1Q96BD8 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SKA1Q96BD8 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.78□□□□□ -1.8
SKA1Q96BD8 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.78□□□□□ -1.8
SKA1Q96BD8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.78□□□□□ -1.8
SKA1Q96BD8 CBWD4P-201ENST00000445695 655 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 RPS3AP46-201ENST00000448352 682 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.78□□□□□ -1.8
SKA1Q96BD8 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.78□□□□□ -1.8
SKA1Q96BD8 AL031183.1-201ENST00000457667 207 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.78□□□□□ -1.8
SKA1Q96BD8 SNORD105B-201ENST00000458770 79 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 AC008481.1-201ENST00000463278 396 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 AC104472.2-201ENST00000469035 601 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 AC004263.1-201ENST00000479327 332 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 AC106707.2-201ENST00000484182 374 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.78□□□□□ -1.8
SKA1Q96BD8 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.78□□□□□ -1.8
SKA1Q96BD8 AC026784.1-201ENST00000507986 352 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 RNU6-352P-201ENST00000516908 107 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 AC093331.1-201ENST00000521474 169 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 AC022695.1-201ENST00000522089 237 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SKA1Q96BD8 AP000867.2-201ENST00000532468 320 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.78□□□□□ -1.8
SKA1Q96BD8 AC011602.1-201ENST00000546484 331 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 ZNF321P-202ENST00000550843 495 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 DUXAP6-201ENST00000553858 601 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 AL133153.1-201ENST00000557756 303 ntBASIC3.78□□□□□ -1.8
SKA1Q96BD8 MIR4307-201ENST00000582802 84 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms