Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 RNU1-132P-201ENST00000364300 164 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 RNA5SP366-201ENST00000365454 123 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 Y_RNA.387-201ENST00000383918 102 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 Y_RNA.530-201ENST00000384587 101 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 AL354751.2-201ENST00000415471 210 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 BTF3L4P3-201ENST00000418879 476 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 AL137014.1-201ENST00000420490 1226 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 MTCO2P12-201ENST00000427426 682 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 RNA5SP103-201ENST00000459503 118 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 RPS15AP36-201ENST00000492022 382 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 MTCO1P29-201ENST00000496868 288 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 FAM206BP-201ENST00000510179 541 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 PARP4P3-201ENST00000510265 317 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 MTCO1P24-201ENST00000515438 1558 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 RNA5SP446-201ENST00000515955 82 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 Y_RNA.665-201ENST00000516177 98 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 HPRT1P3-201ENST00000539521 576 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 AL161713.1-201ENST00000555538 145 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 MTCO3P13-201ENST00000577757 781 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 MIR6130-201ENST00000619419 109 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 AC025034.2-201ENST00000623264 286 ntBASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.59□□□□□ -1.67
SH3RF2Q8TEC5 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
SH3RF2Q8TEC5 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SH3RF2Q8TEC5 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SH3RF2Q8TEC5 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AL645937.1-201ENST00000641739 1652 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 Y_RNA.315-201ENST00000365117 102 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 Y_RNA.373-201ENST00000365600 103 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 MIR3065-201ENST00000390137 79 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 SNORA11F-201ENST00000408237 128 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 RPL21P24-201ENST00000413752 448 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 NDUFB4P5-201ENST00000415445 361 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 RPS26P2-201ENST00000440331 348 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 RNU7-180P-201ENST00000459240 63 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 RN7SL432P-201ENST00000484057 298 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 RPL7P20-201ENST00000520308 745 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AP003730.1-201ENST00000524605 285 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 TRAV8-5-201ENST00000537369 341 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 SCOCP1-201ENST00000554676 349 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AC007224.1-201ENST00000564410 144 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 MIR3160-1-201ENST00000577972 85 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 RN7SL176P-201ENST00000580352 264 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AC091178.1-203ENST00000584586 279 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 MIR4424-201ENST00000585257 86 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AL020997.2-201ENST00000602607 184 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AC079587.1-201ENST00000603846 277 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 uc_338.34-201ENST00000617467 174 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 SNHG22-203ENST00000617833 660 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AL023881.1-201ENST00000621088 301 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 AC011155.2-201ENST00000623202 216 ntBASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SH3RF2Q8TEC5 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.57□□□□□ -1.68
SH3RF2Q8TEC5 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SH3RF2Q8TEC5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
SH3RF2Q8TEC5 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SH3RF2Q8TEC5 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SH3RF2Q8TEC5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SH3RF2Q8TEC5 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.57□□□□□ -1.68
SH3RF2Q8TEC5 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms