Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SH3RF1Q7Z6J0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SH3RF1Q7Z6J0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
SH3RF1Q7Z6J0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.02□□□□□ -1.45
SH3RF1Q7Z6J0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SH3RF1Q7Z6J0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
SH3RF1Q7Z6J0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 HSPA8P4-201ENST00000511877 1920 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 AL049555.1-201ENST00000562834 1933 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 AL137141.1-201ENST00000624622 4836 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 AC126755.2-208ENST00000327792 462 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 AC138969.1-213ENST00000331436 462 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 RNY1P16-201ENST00000363063 111 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 Y_RNA.297-201ENST00000364950 91 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 RNU6-596P-201ENST00000365395 98 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 RNU6-1329P-201ENST00000365664 107 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 MIR628-201ENST00000385229 95 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 RNU2-14P-201ENST00000411053 191 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 AC011753.3-201ENST00000443436 406 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 AL138752.1-201ENST00000452964 351 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 RPL37P6-201ENST00000460682 294 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 ACA59.1-201ENST00000515966 143 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 RNU5B-3P-201ENST00000516601 115 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 RNU6-677P-201ENST00000516914 101 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 RAB9BP1-201ENST00000519581 626 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 AC209154.1-201ENST00000582156 337 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 AC006557.5-201ENST00000603126 811 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 AL355877.2-201ENST00000603670 358 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 AC104763.2-201ENST00000604179 382 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 TUG1_2.1-201ENST00000614234 87 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 MIR7641-1-201ENST00000627518 61 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 AC074101.1-201ENST00000637861 241 ntBASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.01□□□□□ -1.45
SH3RF1Q7Z6J0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AC008758.3-201ENST00000507003 1829 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 RNU6-740P-201ENST00000364734 105 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 Y_RNA.471-201ENST00000384312 102 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 RNU6-45P-201ENST00000384471 107 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 MIR192-201ENST00000384915 110 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 RNU6-174P-201ENST00000410406 106 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 RPS12P5-201ENST00000423449 371 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 MYL8P-204ENST00000431574 518 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 DAP3P1-201ENST00000441522 278 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 LINC01399-202ENST00000458450 244 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AP000942.1-201ENST00000463969 747 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 RN7SL814P-201ENST00000487715 300 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 SCARNA16.4-201ENST00000516956 187 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AC104576.1-201ENST00000524225 88 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AC011447.4-201ENST00000587562 111 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AC012119.1-201ENST00000603184 222 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AC006363.1-201ENST00000603806 463 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AC002044.1-201ENST00000606707 158 ntBASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
SH3RF1Q7Z6J0 AC004158.1-201ENST00000564508 4319 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms