Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.45□□□□□ -1.7
KRT28Q7Z3Y7 AC092104.1-201ENST00000497346 1441 ntBASIC4.45□□□□□ -1.7
KRT28Q7Z3Y7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.45□□□□□ -1.7
KRT28Q7Z3Y7 DCAF13P1-201ENST00000495256 1330 ntBASIC4.45□□□□□ -1.7
KRT28Q7Z3Y7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
KRT28Q7Z3Y7 AL359893.1-201ENST00000447628 1580 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 SRP72P2-201ENST00000344851 1979 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 AL161781.1-201ENST00000354277 403 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 Y_RNA.97-201ENST00000363094 102 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 SNORD74.4-201ENST00000364129 80 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 RNU4-75P-201ENST00000364621 146 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 RNU5E-5P-201ENST00000365379 116 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 RPS7P13-201ENST00000413955 498 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 BX890604.2-201ENST00000427883 474 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 SKP1P1-201ENST00000438081 489 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 RPL7P52-201ENST00000449200 742 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 SSXP1-201ENST00000453640 473 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 MIR4307-201ENST00000582802 84 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 AL355812.1-201ENST00000603215 216 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 AC105429.2-201ENST00000610567 517 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 AL359715.5-201ENST00000623431 443 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 MIR6715B-201ENST00000637172 77 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 Z73965.1-201ENST00000623412 2297 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 AC006378.2-201ENST00000623178 2476 ntBASIC4.44□□□□□ -1.7
KRT28Q7Z3Y7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 Y_RNA.359-201ENST00000365498 102 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 RNU6-744P-201ENST00000365557 107 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 RNU6-1316P-201ENST00000384242 108 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 SNORA7.4-201ENST00000384249 137 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 RNU6-809P-201ENST00000384461 107 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AL663109.1-201ENST00000411498 844 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 MTND1P28-201ENST00000435623 950 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AL357552.1-201ENST00000445254 415 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 HMGB1P36-201ENST00000487709 576 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AC023424.2-201ENST00000493479 777 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 OR5H5P-201ENST00000503164 928 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AP002453.2-201ENST00000533503 320 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AC090615.1-201ENST00000577519 154 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AC015917.1-201ENST00000579654 510 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AC104073.3-201ENST00000610942 955 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AL157817.1-201ENST00000614264 790 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AC004825.2-201ENST00000616634 455 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 AC009509.4-201ENST00000619202 509 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.43□□□□□ -1.7
KRT28Q7Z3Y7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 RIOK3P1-201ENST00000418778 1528 ntBASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRT28Q7Z3Y7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms