Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 AC009643.2-201ENST00000603543 1448 ntBASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 Y_RNA.27-201ENST00000362540 103 ntBASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 MIR1178-201ENST00000408396 91 ntBASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 RNU2-21P-201ENST00000410368 188 ntBASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 RPL21P90-201ENST00000415692 466 ntBASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 CYCSP43-201ENST00000438233 310 ntBASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 AC087190.1-201ENST00000484462 480 ntBASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 AC107032.1-201ENST00000485945 480 ntBASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 AC074250.1-201ENST00000511117 192 ntBASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 AC016065.2-201ENST00000514530 444 ntBASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 RNU7-200P-201ENST00000516105 62 ntBASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 HNRNPCP4-201ENST00000571636 900 ntBASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 AP001485.1-201ENST00000604799 199 ntBASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 AC008962.1-201ENST00000605729 304 ntBASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 AC005344.1-201ENST00000613391 459 ntBASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LYSMD3Q7Z3D4 DDX10P1-201ENST00000448545 1933 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 AC006206.1-201ENST00000544842 3387 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 AL391684.1-202ENST00000641293 1636 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 SNORA16A-201ENST00000384342 137 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 RNU6-700P-201ENST00000391043 107 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 RPS29P13-201ENST00000402041 169 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 AL591034.2-201ENST00000402839 359 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 AL159987.2-201ENST00000432754 307 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 TPT1P13-201ENST00000449760 499 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 RN7SL188P-201ENST00000469842 285 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 NDUFB5P1-201ENST00000508134 564 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 RNU6-352P-201ENST00000516908 107 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 IGLVIV-53-201ENST00000520107 367 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 MRPS36P4-201ENST00000534436 298 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 TRAV32-201ENST00000553993 340 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 AL121917.1-203ENST00000605534 577 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 AL031601.2-202ENST00000622650 282 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 ZNF285B-201ENST00000561698 1767 ntBASIC5.5□□□□□ -1.53
LYSMD3Q7Z3D4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LYSMD3Q7Z3D4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.49□□□□□ -1.53
LYSMD3Q7Z3D4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LYSMD3Q7Z3D4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LYSMD3Q7Z3D4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
LYSMD3Q7Z3D4 AP001148.1-201ENST00000624124 2359 ntBASIC5.49□□□□□ -1.53
LYSMD3Q7Z3D4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.49□□□□□ -1.53
LYSMD3Q7Z3D4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LYSMD3Q7Z3D4 ZNF299P-201ENST00000406845 1804 ntBASIC5.49□□□□□ -1.53
LYSMD3Q7Z3D4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
LYSMD3Q7Z3D4 RNU6-858P-201ENST00000362436 107 ntBASIC5.49□□□□□ -1.53
LYSMD3Q7Z3D4 RNA5SP319-201ENST00000362768 119 ntBASIC5.49□□□□□ -1.53
LYSMD3Q7Z3D4 Y_RNA.76-201ENST00000362931 109 ntBASIC5.49□□□□□ -1.53
LYSMD3Q7Z3D4 U8.8-201ENST00000365399 135 ntBASIC5.49□□□□□ -1.53
LYSMD3Q7Z3D4 RNU6-933P-201ENST00000384424 107 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms