| ATG9A | Q7Z3C6 | AC025588.4-201 | ENST00000615802 | 908 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| ATG9A | Q7Z3C6 | MIR7844-201 | ENST00000616161 | 122 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| ATG9A | Q7Z3C6 | AC009090.3-201 | ENST00000616553 | 565 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| ATG9A | Q7Z3C6 | U73479.1-201 | ENST00000618062 | 168 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| ATG9A | Q7Z3C6 | U7.8-201 | ENST00000619968 | 63 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| ATG9A | Q7Z3C6 | AC006927.3-201 | ENST00000638789 | 384 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| ATG9A | Q7Z3C6 | AC005183.1-201 | ENST00000603687 | 1979 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| ATG9A | Q7Z3C6 | AC097714.1-201 | ENST00000511272 | 1647 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | KBTBD3-207 | ENST00000534815 | 3396 nt | TSL 5 BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | SEMA3D-201 | ENST00000284136 | 6265 nt | APPRIS P1 TSL 5 BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | LUZP2-208 | ENST00000620308 | 4981 nt | TSL 5 BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | DNAH12-201 | ENST00000311202 | 1555 nt | TSL 2 BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC118273.1-201 | ENST00000525324 | 3006 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | ATXN3-248 | ENST00000558190 | 26812 nt | APPRIS P1 TSL 1 (best) BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | MIR22-201 | ENST00000362190 | 85 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | MT-TC-201 | ENST00000387405 | 66 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | RNU6-920P-201 | ENST00000410926 | 92 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | SEPT2P1-201 | ENST00000419651 | 180 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | OFD1P18Y-201 | ENST00000420889 | 959 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AL109947.1-201 | ENST00000423747 | 382 nt | TSL 2 BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | CKS1BP5-201 | ENST00000434172 | 273 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC020594.1-201 | ENST00000437680 | 338 nt | TSL 3 BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | MTND1P30-201 | ENST00000441241 | 901 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AL831737.1-201 | ENST00000441288 | 271 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | HSPE1P28-201 | ENST00000443139 | 211 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | IGKV1OR-3-201 | ENST00000446944 | 348 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | IQCG-204 | ENST00000453254 | 1230 nt | TSL 2 BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | SUMO2P2-201 | ENST00000456482 | 255 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | RC3H2-207 | ENST00000471874 | 749 nt | TSL 1 (best) BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC117440.1-201 | ENST00000474107 | 571 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC099499.1-201 | ENST00000505040 | 558 nt | TSL 3 BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC010625.1-201 | ENST00000511296 | 403 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | MTND5P4-201 | ENST00000514978 | 288 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC009812.2-201 | ENST00000517657 | 457 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC106038.2-201 | ENST00000520706 | 568 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC022240.1-201 | ENST00000532065 | 684 nt | TSL 1 (best) BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | LINC02235-201 | ENST00000534675 | 466 nt | TSL 5 BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | NDUFAF4P1-201 | ENST00000559425 | 519 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC012435.1-202 | ENST00000568772 | 240 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC007495.1-203 | ENST00000569025 | 888 nt | TSL 5 BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC090371.2-202 | ENST00000582239 | 644 nt | TSL 5 BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC027514.2-201 | ENST00000591014 | 637 nt | TSL 3 BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC110760.3-201 | ENST00000598794 | 467 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC011468.4-201 | ENST00000603942 | 409 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC080013.6-201 | ENST00000606185 | 215 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | NPPA-AS1_3.1-201 | ENST00000617059 | 108 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AL357080.1-201 | ENST00000617394 | 239 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AL354810.1-201 | ENST00000618134 | 635 nt | TSL 3 BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | MARCH7-202 | ENST00000409175 | 2402 nt | APPRIS P1 TSL 2 BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | CCDC178-213 | ENST00000583930 | 3094 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | ERBIN-203 | ENST00000380938 | 4701 nt | TSL 2 BASIC | 3.77 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | ELAVL2-204 | ENST00000397312 | 3805 nt | APPRIS P3 TSL 1 (best) BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | ZNF807-201 | ENST00000328088 | 1707 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | TUG1-202 | ENST00000521091 | 2110 nt | TSL 1 (best) BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | ZNF678-202 | ENST00000397097 | 8212 nt | APPRIS P1 TSL 1 (best) BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | ZNF479-202 | ENST00000331162 | 2072 nt | APPRIS P1 TSL 1 (best) BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | TEX30-201 | ENST00000376019 | 1689 nt | TSL 2 BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | LMNTD1-204 | ENST00000458174 | 1677 nt | APPRIS ALT2 TSL 2 BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | SNORD82-201 | ENST00000365530 | 70 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | SNORD116-9-201 | ENST00000384000 | 95 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | SNORD116-3-201 | ENST00000384287 | 95 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | SNORD116-1-201 | ENST00000384335 | 95 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | SNORD116-7-201 | ENST00000384404 | 95 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | SNORD116-5-201 | ENST00000384462 | 95 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | HIGD1C-201 | ENST00000398455 | 371 nt | APPRIS P1 TSL 1 (best) BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AL121972.1-201 | ENST00000402023 | 252 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | RPL7P8-201 | ENST00000411964 | 730 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | RPL35AP12-201 | ENST00000425362 | 338 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AL591475.1-201 | ENST00000429060 | 489 nt | TSL 2 BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | MTND1P20-201 | ENST00000430341 | 950 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | GACAT1-202 | ENST00000441383 | 540 nt | TSL 4 BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC104563.1-201 | ENST00000476147 | 376 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | RN7SL20P-201 | ENST00000488827 | 297 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | TMEM251P1-201 | ENST00000503717 | 318 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC096577.1-203 | ENST00000506386 | 541 nt | TSL 3 BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC093809.1-201 | ENST00000509155 | 340 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC024589.1-201 | ENST00000512207 | 263 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC103952.1-201 | ENST00000521872 | 590 nt | TSL 3 BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC087276.1-201 | ENST00000529659 | 480 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | RERG-IT1-201 | ENST00000539734 | 301 nt | TSL 3 BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC013417.1-201 | ENST00000549896 | 271 nt | TSL 5 BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | EIF4BP1-201 | ENST00000554881 | 351 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | ANKRD36BP2-206 | ENST00000575193 | 1245 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | MIR3915-201 | ENST00000578518 | 97 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AP001004.1-201 | ENST00000582468 | 324 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | RNASEH2B-AS1-202 | ENST00000593369 | 648 nt | TSL 5 BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AL451007.1-201 | ENST00000595491 | 289 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC025588.3-201 | ENST00000604182 | 274 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AL137843.1-201 | ENST00000605078 | 385 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | ZRANB2-AS2-218 | ENST00000608360 | 722 nt | TSL 5 BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC135507.2-201 | ENST00000612443 | 309 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC073968.1-201 | ENST00000618594 | 637 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | PLCE1P1-201 | ENST00000622094 | 305 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC007494.3-201 | ENST00000624660 | 743 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | SYNE2-202 | ENST00000344113 | 21777 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AC116096.1-201 | ENST00000566804 | 2314 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | PWAR6-201 | ENST00000552334 | 4618 nt | BASIC | 3.75 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | AL353746.1-201 | ENST00000566293 | 6881 nt | BASIC | 3.75 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | SLC5A3-201 | ENST00000381151 | 11576 nt | APPRIS P1 TSL 1 (best) BASIC | 3.75 | □□□□□ -1.81 | | |
| ATG9A | Q7Z3C6 | MYOT-202 | ENST00000421631 | 1474 nt | TSL 2 BASIC | 3.75 | □□□□□ -1.81 | | |