Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 AL731566.1-201ENST00000620490 1937 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 Y_RNA.152-201ENST00000363578 100 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 RNA5SP435-201ENST00000364044 108 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 Y_RNA.380-201ENST00000365663 111 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 RNU6-356P-201ENST00000384140 107 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 RNU6-842P-201ENST00000384269 107 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 RNU6-784P-201ENST00000384330 106 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 SNORA17A-201ENST00000391185 133 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 RNA5SP178-201ENST00000410380 128 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 AC096664.2-201ENST00000411843 406 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 AC011933.1-201ENST00000413334 321 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 RPL7AP49-201ENST00000429522 581 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 AL591438.1-201ENST00000433508 581 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 GSTM5P1-201ENST00000434751 660 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 Z98949.2-201ENST00000440996 144 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 AC023141.9-201ENST00000458734 412 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 RN7SL51P-201ENST00000468230 285 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 AC092754.1-201ENST00000472975 479 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 AP000797.2-201ENST00000475768 606 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 RN7SL466P-201ENST00000497546 295 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 GMPSP1-201ENST00000514075 579 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 RNU4-77P-201ENST00000516692 156 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 RNU6-914P-201ENST00000516749 109 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 SNORD95-201ENST00000579879 68 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 AL355297.3-201ENST00000604082 446 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 AC244107.2-201ENST00000611773 76 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 SNORA17.5-201ENST00000630429 132 ntBASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LRFN4Q6PJG9 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.65
LRFN4Q6PJG9 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 SNORA63.7-201ENST00000365579 123 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 OR1L6-202ENST00000373684 1044 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 RNU6-823P-201ENST00000391042 103 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 RNU6-1109P-201ENST00000391187 107 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 EI24P4-201ENST00000423683 1078 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 HSFY6P-201ENST00000445573 403 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 AC112492.4-201ENST00000456549 352 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 RN7SL717P-201ENST00000478343 297 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 AC087369.1-201ENST00000520775 996 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 AC007991.1-201ENST00000522680 631 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 AC008489.1-201ENST00000524271 483 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 AC109446.1-201ENST00000566172 220 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 RN7SL290P-201ENST00000578661 300 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 AL589674.2-201ENST00000604304 337 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 HMGN2P28-201ENST00000606102 262 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 AC005344.1-201ENST00000613391 459 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 AL031601.2-202ENST00000622650 282 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 SMG1P4-204ENST00000523028 4131 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 AC091812.1-201ENST00000432235 1948 ntBASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.77□□□□□ -1.65
LRFN4Q6PJG9 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN4Q6PJG9 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.76□□□□□ -1.65
LRFN4Q6PJG9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN4Q6PJG9 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN4Q6PJG9 AC005183.1-201ENST00000603687 1979 ntBASIC4.76□□□□□ -1.65
LRFN4Q6PJG9 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRFN4Q6PJG9 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LRFN4Q6PJG9 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
LRFN4Q6PJG9 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms