Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.72□□□□□ -2.13
HIST1H1AQ02539 AC068620.4-201ENST00000636730 1182 ntBASIC1.72□□□□□ -2.13
HIST1H1AQ02539 CCT4P2-201ENST00000233836 1548 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.71□□□□□ -2.14
HIST1H1AQ02539 RNU6-670P-201ENST00000364312 104 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 SNORA16B-201ENST00000364674 135 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 OR5H15-201ENST00000383696 930 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HIST1H1AQ02539 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.71□□□□□ -2.14
HIST1H1AQ02539 AC107081.1-201ENST00000414975 361 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.71□□□□□ -2.14
HIST1H1AQ02539 AC004866.2-201ENST00000438285 481 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 FGF7P5-201ENST00000441829 291 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 OSTCP8-201ENST00000445117 448 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 MRPL35P4-201ENST00000453682 566 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 snoU13.28-201ENST00000459235 104 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 RNU7-23P-201ENST00000459465 62 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 AC004263.1-201ENST00000479327 332 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 OR52A4P-202ENST00000481634 799 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 RPL23AP49-201ENST00000492925 468 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 RN7SL636P-201ENST00000497504 294 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 OR52A4P-203ENST00000498233 1014 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.71□□□□□ -2.14
HIST1H1AQ02539 RNU4-29P-201ENST00000515943 174 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.71□□□□□ -2.14
HIST1H1AQ02539 AC008676.3-201ENST00000521237 435 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 AC025857.1-201ENST00000525252 377 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 AP001646.1-201ENST00000527936 915 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 AC027176.1-201ENST00000560204 514 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 MIR5007-201ENST00000583098 95 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.71□□□□□ -2.14
HIST1H1AQ02539 SDR42E1P2-201ENST00000614861 481 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.71□□□□□ -2.14
HIST1H1AQ02539 SDR42E1P4-201ENST00000620894 481 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 MIR6766-201ENST00000622641 72 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 AC091932.3-201ENST00000624223 323 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 AL136360.1-201ENST00000503377 1900 ntBASIC1.71□□□□□ -2.14
HIST1H1AQ02539 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
HIST1H1AQ02539 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.7□□□□□ -2.14
HIST1H1AQ02539 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.7□□□□□ -2.14
HIST1H1AQ02539 AL122016.1-201ENST00000403365 367 ntBASIC1.7□□□□□ -2.14
HIST1H1AQ02539 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.7□□□□□ -2.14
HIST1H1AQ02539 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.7□□□□□ -2.14
HIST1H1AQ02539 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.7□□□□□ -2.14
HIST1H1AQ02539 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.7□□□□□ -2.14
HIST1H1AQ02539 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.7□□□□□ -2.14
HIST1H1AQ02539 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.7□□□□□ -2.14
HIST1H1AQ02539 MTCYBP3-201ENST00000445588 1137 ntBASIC1.7□□□□□ -2.14
HIST1H1AQ02539 AC107626.1-201ENST00000471084 183 ntBASIC1.7□□□□□ -2.14
HIST1H1AQ02539 AC109486.1-201ENST00000486833 374 ntBASIC1.7□□□□□ -2.14
HIST1H1AQ02539 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.7□□□□□ -2.14
HIST1H1AQ02539 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.7□□□□□ -2.14
HIST1H1AQ02539 ANP32BP3-201ENST00000559213 706 ntBASIC1.7□□□□□ -2.14
HIST1H1AQ02539 AC022069.1-201ENST00000582910 658 ntBASIC1.7□□□□□ -2.14
HIST1H1AQ02539 AP002826.1-201ENST00000608835 315 ntBASIC1.7□□□□□ -2.14
HIST1H1AQ02539 OR10AB1P-201ENST00000609613 938 ntBASIC1.7□□□□□ -2.14
HIST1H1AQ02539 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.7□□□□□ -2.14
HIST1H1AQ02539 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
HIST1H1AQ02539 AL160394.1-201ENST00000624765 724 ntBASIC1.7□□□□□ -2.14
HIST1H1AQ02539 DDX10P1-201ENST00000448545 1933 ntBASIC1.7□□□□□ -2.14
HIST1H1AQ02539 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.7□□□□□ -2.14
HIST1H1AQ02539 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 RNU6-1197P-201ENST00000391183 107 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 ATF1P1-201ENST00000406040 927 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AC010385.1-201ENST00000412374 256 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AL714022.1-201ENST00000439897 151 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AC116337.2-201ENST00000477662 156 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AC090453.1-201ENST00000495560 436 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 RNU6-488P-201ENST00000515918 99 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 RNU1-40P-201ENST00000516816 164 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 RNU1-97P-201ENST00000516872 164 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 CASP1P1-201ENST00000526345 212 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 OR11H5P-201ENST00000554039 926 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 HSPE1P3-201ENST00000559254 309 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AC103710.4-201ENST00000609301 899 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AC013562.2-201ENST00000611632 603 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AC009159.1-201ENST00000618386 642 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 AC073968.1-201ENST00000618594 637 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 CTSLP2-204ENST00000629029 392 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.69□□□□□ -2.14
HIST1H1AQ02539 Z99496.1-201ENST00000469424 1477 ntBASIC1.69□□□□□ -2.14
HIST1H1AQ02539 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms