Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RNU2-47P-201ENST00000410649 186 ntBASIC2.81□□□□□ -1.96
LIM2P55344 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.81□□□□□ -1.96
LIM2P55344 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.81□□□□□ -1.96
LIM2P55344 MTCO2P21-201ENST00000419780 677 ntBASIC2.81□□□□□ -1.96
LIM2P55344 AC012498.1-201ENST00000424037 437 ntBASIC2.81□□□□□ -1.96
LIM2P55344 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.81□□□□□ -1.96
LIM2P55344 OR6K5P-201ENST00000447050 945 ntBASIC2.81□□□□□ -1.96
LIM2P55344 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.81□□□□□ -1.96
LIM2P55344 RPS27AP1-201ENST00000475545 471 ntBASIC2.81□□□□□ -1.96
LIM2P55344 AP004217.1-201ENST00000480579 346 ntBASIC2.81□□□□□ -1.96
LIM2P55344 MTND2P14-201ENST00000482139 351 ntBASIC2.81□□□□□ -1.96
LIM2P55344 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.81□□□□□ -1.96
LIM2P55344 RNU6-150P-201ENST00000516237 95 ntBASIC2.81□□□□□ -1.96
LIM2P55344 AC239860.2-201ENST00000525886 270 ntBASIC2.81□□□□□ -1.96
LIM2P55344 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.81□□□□□ -1.96
LIM2P55344 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.81□□□□□ -1.96
LIM2P55344 H3F3AP1-201ENST00000559984 334 ntBASIC2.81□□□□□ -1.96
LIM2P55344 AP005205.1-201ENST00000563503 508 ntBASIC2.81□□□□□ -1.96
LIM2P55344 AC055876.1-202ENST00000567053 138 ntBASIC2.81□□□□□ -1.96
LIM2P55344 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.81□□□□□ -1.96
LIM2P55344 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.81□□□□□ -1.96
LIM2P55344 BBIP1P1-201ENST00000602999 279 ntBASIC2.81□□□□□ -1.96
LIM2P55344 AC025588.2-201ENST00000604851 466 ntBASIC2.81□□□□□ -1.96
LIM2P55344 AC090186.1-201ENST00000605991 572 ntBASIC2.81□□□□□ -1.96
LIM2P55344 AC106028.5-201ENST00000610332 395 ntBASIC2.81□□□□□ -1.96
LIM2P55344 AL162274.2-201ENST00000614406 332 ntBASIC2.81□□□□□ -1.96
LIM2P55344 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.81□□□□□ -1.96
LIM2P55344 AC011330.2-201ENST00000621680 635 ntBASIC2.81□□□□□ -1.96
LIM2P55344 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LIM2P55344 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LIM2P55344 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.81□□□□□ -1.96
LIM2P55344 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.81□□□□□ -1.96
LIM2P55344 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.81□□□□□ -1.96
LIM2P55344 AL513185.3-201ENST00000433335 1300 ntBASIC2.81□□□□□ -1.96
LIM2P55344 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LIM2P55344 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LIM2P55344 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
LIM2P55344 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LIM2P55344 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
LIM2P55344 AC009812.4-201ENST00000569134 1805 ntBASIC2.8□□□□□ -1.96
LIM2P55344 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
LIM2P55344 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LIM2P55344 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LIM2P55344 ZNF876P-202ENST00000398732 1485 ntBASIC2.8□□□□□ -1.96
LIM2P55344 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LIM2P55344 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LIM2P55344 SNORD113-6-201ENST00000363345 75 ntBASIC2.8□□□□□ -1.96
LIM2P55344 MIR135A2-201ENST00000384854 100 ntBASIC2.8□□□□□ -1.96
LIM2P55344 SNORA11.1-201ENST00000408133 129 ntBASIC2.8□□□□□ -1.96
LIM2P55344 RPL7P8-201ENST00000411964 730 ntBASIC2.8□□□□□ -1.96
LIM2P55344 AC083875.1-201ENST00000419509 405 ntBASIC2.8□□□□□ -1.96
LIM2P55344 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.8□□□□□ -1.96
LIM2P55344 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.8□□□□□ -1.96
LIM2P55344 AC002381.1-201ENST00000447049 280 ntBASIC2.8□□□□□ -1.96
LIM2P55344 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.8□□□□□ -1.96
LIM2P55344 BX322784.1-201ENST00000455793 1077 ntBASIC2.8□□□□□ -1.96
LIM2P55344 MEMO1P3-201ENST00000459811 302 ntBASIC2.8□□□□□ -1.96
LIM2P55344 AC092185.1-201ENST00000491371 97 ntBASIC2.8□□□□□ -1.96
LIM2P55344 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.8□□□□□ -1.96
LIM2P55344 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.8□□□□□ -1.96
LIM2P55344 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
LIM2P55344 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.8□□□□□ -1.96
LIM2P55344 RN7SKP265-201ENST00000516448 223 ntBASIC2.8□□□□□ -1.96
LIM2P55344 RNU6-714P-201ENST00000516963 103 ntBASIC2.8□□□□□ -1.96
LIM2P55344 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.8□□□□□ -1.96
LIM2P55344 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.8□□□□□ -1.96
LIM2P55344 OR5G4P-201ENST00000525251 760 ntBASIC2.8□□□□□ -1.96
LIM2P55344 HIGD1AP10-201ENST00000527837 282 ntBASIC2.8□□□□□ -1.96
LIM2P55344 MTND1P24-201ENST00000552175 861 ntBASIC2.8□□□□□ -1.96
LIM2P55344 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.8□□□□□ -1.96
LIM2P55344 MED28P6-201ENST00000558776 231 ntBASIC2.8□□□□□ -1.96
LIM2P55344 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.8□□□□□ -1.96
LIM2P55344 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LIM2P55344 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.8□□□□□ -1.96
LIM2P55344 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.8□□□□□ -1.96
LIM2P55344 AP001330.4-201ENST00000604350 154 ntBASIC2.8□□□□□ -1.96
LIM2P55344 AL022099.1-201ENST00000604551 712 ntBASIC2.8□□□□□ -1.96
LIM2P55344 AL133507.1-201ENST00000605269 557 ntBASIC2.8□□□□□ -1.96
LIM2P55344 AL158042.1-201ENST00000605338 460 ntBASIC2.8□□□□□ -1.96
LIM2P55344 AC107952.2-201ENST00000606048 486 ntBASIC2.8□□□□□ -1.96
LIM2P55344 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.8□□□□□ -1.96
LIM2P55344 ATP5A1P2-202ENST00000616464 443 ntBASIC2.8□□□□□ -1.96
LIM2P55344 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LIM2P55344 AC095031.1-201ENST00000623685 672 ntBASIC2.8□□□□□ -1.96
LIM2P55344 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.8□□□□□ -1.96
LIM2P55344 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.8□□□□□ -1.96
LIM2P55344 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LIM2P55344 AC087359.1-201ENST00000508335 1740 ntBASIC2.79□□□□□ -1.96
LIM2P55344 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
LIM2P55344 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LIM2P55344 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LIM2P55344 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.79□□□□□ -1.96
LIM2P55344 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LIM2P55344 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.79□□□□□ -1.96
LIM2P55344 SNORA4.1-201ENST00000364263 144 ntBASIC2.79□□□□□ -1.96
LIM2P55344 RNU6-343P-201ENST00000364709 104 ntBASIC2.79□□□□□ -1.96
LIM2P55344 MIR591-201ENST00000385290 95 ntBASIC2.79□□□□□ -1.96
LIM2P55344 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
LIM2P55344 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
LIM2P55344 SNORA48.5-201ENST00000391143 135 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms