Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNU6-343P-201ENST00000364709 104 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 DEFB109C-201ENST00000382575 264 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 DEFB109B-201ENST00000382656 264 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 SNORD51-201ENST00000384320 80 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 RNU6-878P-201ENST00000384578 110 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 AL031121.1-201ENST00000406553 254 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 RNA5SP274-201ENST00000410484 108 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCLP35914 AC098592.1-201ENST00000419352 333 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 AC007742.1-201ENST00000425789 329 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGCLP35914 AC093151.1-201ENST00000427711 313 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 RPS6P15-201ENST00000431996 751 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 ELOCP26-201ENST00000436067 329 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.03□□□□□ -1.92
HMGCLP35914 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCLP35914 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCLP35914 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.03□□□□□ -1.92
HMGCLP35914 SYPL1P1-201ENST00000473622 768 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 AC017015.1-201ENST00000477387 286 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCLP35914 AC093278.1-201ENST00000494700 600 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCLP35914 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGCLP35914 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.03□□□□□ -1.92
HMGCLP35914 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.03□□□□□ -1.92
HMGCLP35914 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCLP35914 AL031281.1-201ENST00000604049 488 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 AC018714.1-201ENST00000605028 208 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HMGCLP35914 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HMGCLP35914 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCLP35914 AC103706.2-201ENST00000638080 240 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.03□□□□□ -1.92
HMGCLP35914 AC092435.3-201ENST00000565538 3654 ntBASIC3.03□□□□□ -1.92
HMGCLP35914 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HMGCLP35914 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
HMGCLP35914 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGCLP35914 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGCLP35914 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HMGCLP35914 RNU6-462P-201ENST00000362659 105 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 SNORA4.1-201ENST00000364263 144 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 RNU6-1200P-201ENST00000384162 107 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 MT-TC-201ENST00000387405 66 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 RNU6-821P-201ENST00000390995 107 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 RNU6-952P-201ENST00000391164 108 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 CYCSP45-201ENST00000402289 315 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 AC245054.2-201ENST00000415639 319 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCLP35914 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCLP35914 AL035407.1-201ENST00000429211 571 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 ZYG11AP1-201ENST00000430329 837 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 MTATP6P17-201ENST00000431030 672 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGCLP35914 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGCLP35914 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCLP35914 RPL36AP33-201ENST00000450395 310 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 AL024509.2-201ENST00000493462 493 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 HMGB1P22-201ENST00000505315 124 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGCLP35914 RN7SKP272-201ENST00000516988 232 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGCLP35914 COX6CP8-201ENST00000522620 226 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCLP35914 AC109635.4-202ENST00000531666 412 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 AP002404.1-201ENST00000532005 451 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGCLP35914 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGCLP35914 AC074050.1-201ENST00000563247 211 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 AC145350.1-201ENST00000567426 208 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCLP35914 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGCLP35914 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGCLP35914 NIFKP6-201ENST00000598115 845 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 CLIC4P2-201ENST00000601934 717 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 AL353778.1-201ENST00000603149 408 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 IGHV3-29-201ENST00000604817 344 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 AL590282.1-201ENST00000610379 1136 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.02□□□□□ -1.93
HMGCLP35914 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 AL596245.1-201ENST00000618994 362 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 MTND2P41-201ENST00000637599 773 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGCLP35914 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGCLP35914 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.02□□□□□ -1.93
HMGCLP35914 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.02□□□□□ -1.93
HMGCLP35914 AL035425.3-201ENST00000564206 4996 ntBASIC3.02□□□□□ -1.93
HMGCLP35914 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HMGCLP35914 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HMGCLP35914 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HMGCLP35914 RNU6-433P-201ENST00000363216 104 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 SNORA71.1-201ENST00000364523 117 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 RPL21P3-201ENST00000395517 478 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 USP9YP33-201ENST00000412220 421 ntBASIC3.01□□□□□ -1.93
HMGCLP35914 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms