Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RNU6-95P-201ENST00000384697 107 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 RNU4-25P-201ENST00000410569 230 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 RN7SKP106-201ENST00000410832 272 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.67□□□□□ -1.66
VAMP1P23763 AC245054.2-201ENST00000415639 319 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 AL096701.2-201ENST00000416920 238 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 RPL7P37-201ENST00000425095 738 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 RPL23AP82-202ENST00000427528 469 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.67□□□□□ -1.66
VAMP1P23763 MTATP6P7-201ENST00000453315 681 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 AL034369.1-201ENST00000453808 477 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.67□□□□□ -1.66
VAMP1P23763 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.67□□□□□ -1.66
VAMP1P23763 TRMT10BP1-201ENST00000519377 943 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.67□□□□□ -1.66
VAMP1P23763 NACAP3-201ENST00000552100 481 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 LINC00933-203ENST00000559812 219 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
VAMP1P23763 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.67□□□□□ -1.66
VAMP1P23763 AC069061.3-201ENST00000582254 823 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 AC006116.3-201ENST00000592968 361 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 AL161729.3-201ENST00000603533 673 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 MIR6726-201ENST00000613751 61 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 AL158196.1-201ENST00000616786 434 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 AC068831.7-201ENST00000616954 363 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 AC090971.5-201ENST00000621102 293 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 AC244517.12-201ENST00000623581 663 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.67□□□□□ -1.66
VAMP1P23763 AC100778.3-201ENST00000580060 1750 ntBASIC4.67□□□□□ -1.66
VAMP1P23763 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VAMP1P23763 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.67□□□□□ -1.66
VAMP1P23763 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.67□□□□□ -1.66
VAMP1P23763 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VAMP1P23763 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
VAMP1P23763 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.67□□□□□ -1.66
VAMP1P23763 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VAMP1P23763 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VAMP1P23763 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAMP1P23763 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.66□□□□□ -1.66
VAMP1P23763 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
VAMP1P23763 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VAMP1P23763 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAMP1P23763 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAMP1P23763 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VAMP1P23763 ZNF137P-201ENST00000456718 1920 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
VAMP1P23763 AL731566.1-201ENST00000620490 1937 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.66□□□□□ -1.66
VAMP1P23763 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAMP1P23763 AC023421.1-201ENST00000590535 1785 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.66□□□□□ -1.66
VAMP1P23763 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAMP1P23763 BRAFP1-201ENST00000445336 2703 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAMP1P23763 RNY4P36-201ENST00000391116 96 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 AP000567.1-201ENST00000406413 156 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 RNU4-14P-201ENST00000410858 122 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.66□□□□□ -1.66
VAMP1P23763 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.66□□□□□ -1.66
VAMP1P23763 AL645568.3-201ENST00000433683 316 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 RHOT1P3-201ENST00000436571 331 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 RPL12P3-201ENST00000440080 396 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 PCMTD1P1-201ENST00000455560 355 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 SNRPGP3-201ENST00000469405 227 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 AC058823.1-201ENST00000485315 474 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 HMGN1P11-201ENST00000508668 303 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 AC074255.1-201ENST00000511259 501 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.66□□□□□ -1.66
VAMP1P23763 RNU6-1183P-201ENST00000517054 60 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.66□□□□□ -1.66
VAMP1P23763 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.66□□□□□ -1.66
VAMP1P23763 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.66□□□□□ -1.66
VAMP1P23763 AC084783.1-201ENST00000565846 910 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 MIR3157-201ENST00000578688 85 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.66□□□□□ -1.66
VAMP1P23763 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
VAMP1P23763 AC008638.3-201ENST00000603341 463 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 uc_338.7-201ENST00000621834 124 ntBASIC4.66□□□□□ -1.66
VAMP1P23763 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAMP1P23763 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAMP1P23763 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
VAMP1P23763 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAMP1P23763 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
VAMP1P23763 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.65□□□□□ -1.66
VAMP1P23763 MTND5P7-201ENST00000413558 1798 ntBASIC4.65□□□□□ -1.66
VAMP1P23763 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VAMP1P23763 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.65□□□□□ -1.66
VAMP1P23763 AL133243.3-201ENST00000617415 3004 ntBASIC4.65□□□□□ -1.66
VAMP1P23763 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.65□□□□□ -1.66
VAMP1P23763 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VAMP1P23763 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.65□□□□□ -1.66
VAMP1P23763 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VAMP1P23763 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.65□□□□□ -1.66
VAMP1P23763 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VAMP1P23763 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
VAMP1P23763 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
VAMP1P23763 AC006206.1-201ENST00000544842 3387 ntBASIC4.65□□□□□ -1.66
VAMP1P23763 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms