Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC009977.1-201ENST00000586015 570 ntBASIC1.86□□□□□ -2.11
TNFP01375 AP004247.3-201ENST00000608682 624 ntBASIC1.86□□□□□ -2.11
TNFP01375 AL138880.2-201ENST00000616214 239 ntBASIC1.86□□□□□ -2.11
TNFP01375 RNU6-156P-201ENST00000621869 107 ntBASIC1.86□□□□□ -2.11
TNFP01375 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
TNFP01375 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
TNFP01375 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TNFP01375 CKAP2P1-201ENST00000555477 2049 ntBASIC1.86□□□□□ -2.11
TNFP01375 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TNFP01375 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TNFP01375 MTCO1P6-201ENST00000481192 1384 ntBASIC1.85□□□□□ -2.11
TNFP01375 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TNFP01375 AL596028.1-201ENST00000326971 197 ntBASIC1.85□□□□□ -2.11
TNFP01375 RNU6-1159P-201ENST00000362933 107 ntBASIC1.85□□□□□ -2.11
TNFP01375 RNA5SP99-201ENST00000364020 114 ntBASIC1.85□□□□□ -2.11
TNFP01375 RNA5SP37-201ENST00000365420 130 ntBASIC1.85□□□□□ -2.11
TNFP01375 SNORA51.11-201ENST00000384442 131 ntBASIC1.85□□□□□ -2.11
TNFP01375 RNU6-1072P-201ENST00000384703 107 ntBASIC1.85□□□□□ -2.11
TNFP01375 RNU6-443P-201ENST00000384780 107 ntBASIC1.85□□□□□ -2.11
TNFP01375 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.85□□□□□ -2.11
TNFP01375 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
TNFP01375 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.85□□□□□ -2.11
TNFP01375 DPPA3P1-201ENST00000448050 469 ntBASIC1.85□□□□□ -2.11
TNFP01375 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.85□□□□□ -2.11
TNFP01375 RPL23AP63-201ENST00000498752 471 ntBASIC1.85□□□□□ -2.11
TNFP01375 FABP5P6-201ENST00000510588 409 ntBASIC1.85□□□□□ -2.11
TNFP01375 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.85□□□□□ -2.11
TNFP01375 AK6P1-201ENST00000540219 478 ntBASIC1.85□□□□□ -2.11
TNFP01375 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.85□□□□□ -2.11
TNFP01375 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.85□□□□□ -2.11
TNFP01375 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.85□□□□□ -2.11
TNFP01375 AC106028.5-201ENST00000610332 395 ntBASIC1.85□□□□□ -2.11
TNFP01375 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.85□□□□□ -2.11
TNFP01375 AC010680.1-201ENST00000590024 3590 ntBASIC1.84□□□□□ -2.11
TNFP01375 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TNFP01375 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.84□□□□□ -2.11
TNFP01375 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TNFP01375 SNORA6-201ENST00000384033 151 ntBASIC1.84□□□□□ -2.11
TNFP01375 RNU1-52P-201ENST00000384190 164 ntBASIC1.84□□□□□ -2.11
TNFP01375 RNU6-837P-201ENST00000391056 108 ntBASIC1.84□□□□□ -2.11
TNFP01375 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TNFP01375 CYCSP49-201ENST00000420810 319 ntBASIC1.84□□□□□ -2.11
TNFP01375 AL139109.1-201ENST00000455491 297 ntBASIC1.84□□□□□ -2.11
TNFP01375 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TNFP01375 AC090255.1-201ENST00000495779 349 ntBASIC1.84□□□□□ -2.11
TNFP01375 AC107393.1-201ENST00000512403 346 ntBASIC1.84□□□□□ -2.11
TNFP01375 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.84□□□□□ -2.11
TNFP01375 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.84□□□□□ -2.11
TNFP01375 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.84□□□□□ -2.11
TNFP01375 RPS3AP23-202ENST00000574601 686 ntBASIC1.84□□□□□ -2.11
TNFP01375 AC068790.3-201ENST00000602988 553 ntBASIC1.84□□□□□ -2.11
TNFP01375 RPP40P2-201ENST00000603596 712 ntBASIC1.84□□□□□ -2.11
TNFP01375 AC092954.1-201ENST00000609121 445 ntBASIC1.84□□□□□ -2.11
TNFP01375 MIR6840-201ENST00000611937 71 ntBASIC1.84□□□□□ -2.11
TNFP01375 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.84□□□□□ -2.11
TNFP01375 AP003072.5-201ENST00000623872 773 ntBASIC1.84□□□□□ -2.11
TNFP01375 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
TNFP01375 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TNFP01375 Y_RNA.62-201ENST00000362840 99 ntBASIC1.83□□□□□ -2.12
TNFP01375 RNU4-72P-201ENST00000410754 173 ntBASIC1.83□□□□□ -2.12
TNFP01375 HMGB3P2-201ENST00000411913 584 ntBASIC1.83□□□□□ -2.12
TNFP01375 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.83□□□□□ -2.12
TNFP01375 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.83□□□□□ -2.12
TNFP01375 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.83□□□□□ -2.12
TNFP01375 AC104058.1-201ENST00000448028 297 ntBASIC1.83□□□□□ -2.12
TNFP01375 AC007182.2-201ENST00000489251 402 ntBASIC1.83□□□□□ -2.12
TNFP01375 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.83□□□□□ -2.12
TNFP01375 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.83□□□□□ -2.12
TNFP01375 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.83□□□□□ -2.12
TNFP01375 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.83□□□□□ -2.12
TNFP01375 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.83□□□□□ -2.12
TNFP01375 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.83□□□□□ -2.12
TNFP01375 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.83□□□□□ -2.12
TNFP01375 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.83□□□□□ -2.12
TNFP01375 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.83□□□□□ -2.12
TNFP01375 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.83□□□□□ -2.12
TNFP01375 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.83□□□□□ -2.12
TNFP01375 AL009028.1-201ENST00000604895 802 ntBASIC1.83□□□□□ -2.12
TNFP01375 AC010678.1-201ENST00000614118 713 ntBASIC1.83□□□□□ -2.12
TNFP01375 MIR203B-201ENST00000636080 86 ntBASIC1.83□□□□□ -2.12
TNFP01375 MTND5P28-201ENST00000438005 1594 ntBASIC1.83□□□□□ -2.12
TNFP01375 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
TNFP01375 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
TNFP01375 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
TNFP01375 AL359893.1-201ENST00000447628 1580 ntBASIC1.82□□□□□ -2.12
TNFP01375 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
TNFP01375 HMGB1P5-201ENST00000255320 642 ntBASIC1.82□□□□□ -2.12
TNFP01375 SNORA1.3-201ENST00000384676 136 ntBASIC1.82□□□□□ -2.12
TNFP01375 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
TNFP01375 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TNFP01375 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.82□□□□□ -2.12
TNFP01375 MRPS33P4-201ENST00000434892 317 ntBASIC1.82□□□□□ -2.12
TNFP01375 AC009296.1-201ENST00000443146 155 ntBASIC1.82□□□□□ -2.12
TNFP01375 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.82□□□□□ -2.12
TNFP01375 SETP11-201ENST00000473027 690 ntBASIC1.82□□□□□ -2.12
TNFP01375 FAM92A1P2-202ENST00000504766 877 ntBASIC1.82□□□□□ -2.12
TNFP01375 OR5BM1P-201ENST00000512021 366 ntBASIC1.82□□□□□ -2.12
TNFP01375 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.82□□□□□ -2.12
TNFP01375 snoZ278.1-201ENST00000517059 112 ntBASIC1.82□□□□□ -2.12
TNFP01375 AC087272.1-201ENST00000523624 533 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms