Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC090695.1-201ENST00000561269 1222 ntBASIC2.94□□□□□ -1.94
TIMP1P01033 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.94□□□□□ -1.94
TIMP1P01033 AL109653.1-201ENST00000603091 248 ntBASIC2.94□□□□□ -1.94
TIMP1P01033 AC113368.1-201ENST00000603736 382 ntBASIC2.94□□□□□ -1.94
TIMP1P01033 AC008277.2-201ENST00000605196 797 ntBASIC2.94□□□□□ -1.94
TIMP1P01033 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TIMP1P01033 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.94□□□□□ -1.94
TIMP1P01033 AC107982.1-201ENST00000507171 1300 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 AC109315.1-201ENST00000584143 1347 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TIMP1P01033 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TIMP1P01033 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TIMP1P01033 AP000526.1-201ENST00000603308 1388 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 Y_RNA.25-201ENST00000362528 102 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 RNU5D-1-201ENST00000363299 116 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 RNU6-263P-201ENST00000363811 107 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 RNVU1-3-201ENST00000364313 161 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 SNORD116.1-201ENST00000365628 92 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 Y_RNA.493-201ENST00000384422 102 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 RNU2-28P-201ENST00000410457 189 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 RN7SKP58-201ENST00000411010 305 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 AC245291.1-201ENST00000419501 328 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.93□□□□□ -1.94
TIMP1P01033 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.93□□□□□ -1.94
TIMP1P01033 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.93□□□□□ -1.94
TIMP1P01033 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.93□□□□□ -1.94
TIMP1P01033 snoU13.23-201ENST00000458863 104 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 snoU13.3-201ENST00000459441 104 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 SNORD11.1-201ENST00000459482 85 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 RPS20P22-201ENST00000473700 357 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TIMP1P01033 AC020699.1-201ENST00000505161 445 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 HMGB1P22-201ENST00000505315 124 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 MTND4LP22-201ENST00000508209 276 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 AC008837.2-201ENST00000513076 418 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.93□□□□□ -1.94
TIMP1P01033 IGKV2D-36-201ENST00000518643 226 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.93□□□□□ -1.94
TIMP1P01033 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.93□□□□□ -1.94
TIMP1P01033 OR4T1P-201ENST00000554933 911 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 AGGF1P5-201ENST00000567900 919 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.93□□□□□ -1.94
TIMP1P01033 AC034229.4-201ENST00000607861 441 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 AC004925.1-201ENST00000624256 2706 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
TIMP1P01033 AC004972.1-201ENST00000623934 2209 ntBASIC2.93□□□□□ -1.94
TIMP1P01033 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
TIMP1P01033 AC002546.1-201ENST00000588041 2504 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 CDR1-202ENST00000625883 1485 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TIMP1P01033 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TIMP1P01033 FAM133CP-201ENST00000332869 704 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 MIR26A1-201ENST00000362205 77 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 RNA5SP289-201ENST00000362332 137 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 SNORD56.3-201ENST00000363507 71 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TIMP1P01033 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
TIMP1P01033 SNORA51.6-201ENST00000384151 125 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 RNU6-1242P-201ENST00000391052 103 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 AL590084.1-201ENST00000407885 387 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 RNA5SP425-201ENST00000410336 112 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TIMP1P01033 HMGB3P23-201ENST00000414981 585 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.92□□□□□ -1.94
TIMP1P01033 AC112220.1-201ENST00000434628 355 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 CR769776.1-201ENST00000441254 787 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 RPL23AP76-201ENST00000441860 458 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.92□□□□□ -1.94
TIMP1P01033 AC004022.1-201ENST00000447766 1066 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 HMGB3P8-201ENST00000449709 577 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TIMP1P01033 AC090525.1-201ENST00000479116 478 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.92□□□□□ -1.94
TIMP1P01033 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.92□□□□□ -1.94
TIMP1P01033 AC021146.5-201ENST00000503544 545 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 RNA5SP282-201ENST00000516355 108 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 SNORA31.20-201ENST00000517111 133 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 IGKV3-31-201ENST00000523109 329 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.92□□□□□ -1.94
TIMP1P01033 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TIMP1P01033 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.92□□□□□ -1.94
TIMP1P01033 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.92□□□□□ -1.94
TIMP1P01033 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.92□□□□□ -1.94
TIMP1P01033 AL132657.2-201ENST00000564417 358 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.92□□□□□ -1.94
TIMP1P01033 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.92□□□□□ -1.94
TIMP1P01033 AP001521.1-201ENST00000609150 300 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 AC109809.1-201ENST00000619665 545 ntBASIC2.92□□□□□ -1.94
TIMP1P01033 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TIMP1P01033 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.92□□□□□ -1.94
TIMP1P01033 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TIMP1P01033 RNA5SP383-201ENST00000362934 120 ntBASIC2.91□□□□□ -1.94
TIMP1P01033 RNU6-216P-201ENST00000363282 104 ntBASIC2.91□□□□□ -1.94
TIMP1P01033 RNU6-805P-201ENST00000365643 106 ntBASIC2.91□□□□□ -1.94
TIMP1P01033 RNU6-657P-201ENST00000383904 107 ntBASIC2.91□□□□□ -1.94
TIMP1P01033 RPL31P1-201ENST00000398116 372 ntBASIC2.91□□□□□ -1.94
TIMP1P01033 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.91□□□□□ -1.94
TIMP1P01033 RNU4-53P-201ENST00000410828 140 ntBASIC2.91□□□□□ -1.94
TIMP1P01033 RNU4-78P-201ENST00000410940 126 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms