Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SRGAP3O43295 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SRGAP3O43295 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SRGAP3O43295 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.03□□□□□ -1.6
SRGAP3O43295 Y_RNA.255-201ENST00000364581 97 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 RNA5SP283-201ENST00000365604 119 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SRGAP3O43295 RNU4-6P-201ENST00000410804 122 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 AC004987.3-201ENST00000413879 771 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 MTCYBP8-201ENST00000422855 651 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 DUTP6-201ENST00000425573 462 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 TBCAP1-201ENST00000436520 327 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 AL162151.2-201ENST00000448875 158 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.03□□□□□ -1.6
SRGAP3O43295 RPS11P1-201ENST00000451072 473 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 PPP1R2P5-201ENST00000457256 603 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 AC006512.1-201ENST00000468816 291 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 RPL23AP2-201ENST00000471227 466 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.03□□□□□ -1.6
SRGAP3O43295 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.03□□□□□ -1.6
SRGAP3O43295 AC025554.1-201ENST00000505641 188 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 RNA5SP337-201ENST00000517007 109 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 TOMM20P2-201ENST00000540082 421 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.03□□□□□ -1.6
SRGAP3O43295 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.03□□□□□ -1.6
SRGAP3O43295 MIR3171-201ENST00000584270 74 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 AC010591.1-201ENST00000603941 649 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 AC004853.1-201ENST00000604902 698 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.03□□□□□ -1.6
SRGAP3O43295 AC093838.1-201ENST00000613014 469 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 AC008121.3-201ENST00000618726 433 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.03□□□□□ -1.6
SRGAP3O43295 AC134503.1-201ENST00000633048 54 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SRGAP3O43295 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SRGAP3O43295 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.03□□□□□ -1.6
SRGAP3O43295 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SRGAP3O43295 AC011266.1-201ENST00000624119 3569 ntBASIC5.03□□□□□ -1.6
SRGAP3O43295 AC092447.10-201ENST00000620607 1652 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.02□□□□□ -1.61
SRGAP3O43295 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SRGAP3O43295 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SRGAP3O43295 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SRGAP3O43295 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SRGAP3O43295 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SRGAP3O43295 RNU6-28P-201ENST00000362378 107 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 RNA5SP52-201ENST00000362448 134 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 RNU6-249P-201ENST00000363016 102 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 Y_RNA.216-201ENST00000364205 93 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 Y_RNA.315-201ENST00000365117 102 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 RNU6-996P-201ENST00000365438 107 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.02□□□□□ -1.61
SRGAP3O43295 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.02□□□□□ -1.61
SRGAP3O43295 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.02□□□□□ -1.61
SRGAP3O43295 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.02□□□□□ -1.61
SRGAP3O43295 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.02□□□□□ -1.61
SRGAP3O43295 AL138799.3-201ENST00000438968 350 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 RPL21P133-201ENST00000443666 476 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.02□□□□□ -1.61
SRGAP3O43295 AC079781.2-201ENST00000446424 169 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 PTMAP3-201ENST00000447474 330 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 SNORD19B-201ENST00000459623 84 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 MTND4P17-201ENST00000470444 350 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 AC108043.1-201ENST00000512696 574 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.02□□□□□ -1.61
SRGAP3O43295 RNA5SP154-201ENST00000516193 111 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 SCARNA24.1-201ENST00000516465 137 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.02□□□□□ -1.61
SRGAP3O43295 AP003072.2-201ENST00000527756 676 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.02□□□□□ -1.61
SRGAP3O43295 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SRGAP3O43295 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 AC069240.1-201ENST00000548774 375 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 OR4T1P-201ENST00000554933 911 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 AC008638.3-201ENST00000603341 463 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 AL355816.1-201ENST00000607951 118 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.02□□□□□ -1.61
SRGAP3O43295 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
SRGAP3O43295 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SRGAP3O43295 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SRGAP3O43295 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SRGAP3O43295 AC087190.4-201ENST00000574616 8334 ntBASIC5.02□□□□□ -1.61
SRGAP3O43295 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SRGAP3O43295 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SRGAP3O43295 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SRGAP3O43295 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
SRGAP3O43295 RNU6-254P-201ENST00000363377 107 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 Y_RNA.259-201ENST00000364619 101 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 Y_RNA.387-201ENST00000383918 102 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 Y_RNA.579-201ENST00000390939 94 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SRGAP3O43295 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.01□□□□□ -1.61
SRGAP3O43295 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.01□□□□□ -1.61
SRGAP3O43295 VN1R36P-201ENST00000414936 291 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.01□□□□□ -1.61
SRGAP3O43295 AL691449.1-201ENST00000426570 421 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 AC096632.1-201ENST00000427395 310 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 SRIP2-201ENST00000428470 166 ntBASIC5.01□□□□□ -1.61
SRGAP3O43295 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.01□□□□□ -1.61
SRGAP3O43295 AP000936.3-201ENST00000438127 255 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms