Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NPHP1O15259 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.21□□□□□ -1.74
NPHP1O15259 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.21□□□□□ -1.74
NPHP1O15259 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.21□□□□□ -1.74
NPHP1O15259 HIGD1AP1-201ENST00000550979 275 ntBASIC4.21□□□□□ -1.74
NPHP1O15259 AC090888.2-201ENST00000559765 1144 ntBASIC4.21□□□□□ -1.74
NPHP1O15259 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.21□□□□□ -1.74
NPHP1O15259 AC021171.1-201ENST00000603137 706 ntBASIC4.21□□□□□ -1.74
NPHP1O15259 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.21□□□□□ -1.74
NPHP1O15259 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.21□□□□□ -1.74
NPHP1O15259 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.21□□□□□ -1.74
NPHP1O15259 OR6C71P-202ENST00000641886 1107 ntBASIC4.21□□□□□ -1.74
NPHP1O15259 AF117829.1-206ENST00000621883 3802 ntBASIC4.21□□□□□ -1.74
NPHP1O15259 AC104454.1-201ENST00000421341 1401 ntBASIC4.21□□□□□ -1.74
NPHP1O15259 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPHP1O15259 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NPHP1O15259 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPHP1O15259 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPHP1O15259 RNU6-114P-201ENST00000384704 105 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 AL391417.1-201ENST00000404100 426 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 AC017079.2-201ENST00000416102 485 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 PPP1R11P2-201ENST00000423543 382 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.2□□□□□ -1.74
NPHP1O15259 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.2□□□□□ -1.74
NPHP1O15259 AL008629.1-201ENST00000438615 184 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.2□□□□□ -1.74
NPHP1O15259 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.2□□□□□ -1.74
NPHP1O15259 RPL21P13-201ENST00000488305 481 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 AC096576.1-201ENST00000489014 359 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.2□□□□□ -1.74
NPHP1O15259 AC112198.1-201ENST00000505369 1220 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.2□□□□□ -1.74
NPHP1O15259 SNORA3.4-201ENST00000515969 96 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.2□□□□□ -1.74
NPHP1O15259 AP001804.3-201ENST00000525146 880 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 AC022690.1-201ENST00000526681 550 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 AC087276.1-201ENST00000529659 480 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.2□□□□□ -1.74
NPHP1O15259 AC009094.1-201ENST00000564443 426 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 AC055876.1-202ENST00000567053 138 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 MIR4474-201ENST00000579189 78 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.2□□□□□ -1.74
NPHP1O15259 VN1R90P-201ENST00000595717 726 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 AC073657.2-201ENST00000605661 303 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 AC004067.1-201ENST00000608733 700 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 AC008121.2-201ENST00000614647 523 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 AC008443.7-201ENST00000622195 246 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 AP000676.4-201ENST00000624659 623 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPHP1O15259 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPHP1O15259 MFSD8-233ENST00000641482 4860 ntBASIC4.2□□□□□ -1.74
NPHP1O15259 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPHP1O15259 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.2□□□□□ -1.74
NPHP1O15259 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPHP1O15259 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPHP1O15259 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPHP1O15259 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPHP1O15259 AC092326.2-201ENST00000624772 1561 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 AC138915.3-201ENST00000562908 1389 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 AC007256.1-201ENST00000392253 2765 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPHP1O15259 RNU6-853P-201ENST00000364306 107 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.19□□□□□ -1.74
NPHP1O15259 RPS3AP26-201ENST00000398259 784 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.19□□□□□ -1.74
NPHP1O15259 Z99755.1-201ENST00000414048 380 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 AC098592.1-201ENST00000419352 333 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
NPHP1O15259 RPL21P109-201ENST00000422213 475 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.19□□□□□ -1.74
NPHP1O15259 RPL27AP8-201ENST00000424277 446 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 AL445669.1-201ENST00000426743 755 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 UBE2FP3-201ENST00000436366 524 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.19□□□□□ -1.74
NPHP1O15259 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.19□□□□□ -1.74
NPHP1O15259 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.19□□□□□ -1.74
NPHP1O15259 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.19□□□□□ -1.74
NPHP1O15259 AL359385.1-201ENST00000456509 365 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.19□□□□□ -1.74
NPHP1O15259 AC084357.1-201ENST00000473404 255 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 AC109925.1-201ENST00000478069 331 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 AC011825.1-201ENST00000484967 388 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 AC034222.1-201ENST00000494052 532 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 AC106872.3-201ENST00000495104 446 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 AC020893.1-201ENST00000502452 580 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 AC022447.3-201ENST00000506865 495 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 LTV1P1-201ENST00000510683 1237 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.19□□□□□ -1.74
NPHP1O15259 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.19□□□□□ -1.74
NPHP1O15259 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.19□□□□□ -1.74
NPHP1O15259 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NPHP1O15259 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.19□□□□□ -1.74
NPHP1O15259 MIR3921-201ENST00000577308 85 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.19□□□□□ -1.74
NPHP1O15259 UBE2L4-201ENST00000587688 464 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 AC018714.1-201ENST00000605028 208 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 AC097468.3-201ENST00000607956 456 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 AC009570.1-201ENST00000609599 745 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 AL158801.5-201ENST00000623123 465 ntBASIC4.19□□□□□ -1.74
NPHP1O15259 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms