Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF223E7ERA6 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RNF223E7ERA6 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF223E7ERA6 RNU4-10P-201ENST00000364383 140 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 RNU6-166P-201ENST00000384371 107 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 RNU1-46P-201ENST00000384425 164 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 RNU2-54P-201ENST00000410299 190 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 RNA5SP44-201ENST00000410446 133 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 AC138623.1-201ENST00000418060 216 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 AL662874.1-201ENST00000426065 230 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.25□□□□□ -1.57
RNF223E7ERA6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.25□□□□□ -1.57
RNF223E7ERA6 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 RN7SL326P-201ENST00000477493 296 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 RN7SL273P-201ENST00000481561 299 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 AC007686.1-201ENST00000488511 463 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 RNA5SP438-201ENST00000516561 112 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 RNU6-453P-201ENST00000516819 85 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 SNORA31.19-201ENST00000517079 126 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.25□□□□□ -1.57
RNF223E7ERA6 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RNF223E7ERA6 AC018448.1-201ENST00000552843 316 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.25□□□□□ -1.57
RNF223E7ERA6 AC068768.2-201ENST00000602352 343 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 AC010999.1-201ENST00000611856 324 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 AC034229.6-201ENST00000623704 224 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC5.25□□□□□ -1.57
RNF223E7ERA6 AL049767.1-202ENST00000637826 242 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RNF223E7ERA6 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.25□□□□□ -1.57
RNF223E7ERA6 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF223E7ERA6 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RNF223E7ERA6 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF223E7ERA6 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RNF223E7ERA6 SPATA31C1-201ENST00000420021 3895 ntBASIC5.25□□□□□ -1.57
RNF223E7ERA6 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF223E7ERA6 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.25□□□□□ -1.57
RNF223E7ERA6 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
RNF223E7ERA6 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF223E7ERA6 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.25□□□□□ -1.57
RNF223E7ERA6 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF223E7ERA6 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RNF223E7ERA6 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RNF223E7ERA6 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RNF223E7ERA6 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF223E7ERA6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 SAGE2P-201ENST00000420011 2126 ntBASIC5.24□□□□□ -1.57
RNF223E7ERA6 AP001642.1-201ENST00000624727 2117 ntBASIC5.24□□□□□ -1.57
RNF223E7ERA6 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF223E7ERA6 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF223E7ERA6 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF223E7ERA6 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF223E7ERA6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF223E7ERA6 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF223E7ERA6 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF223E7ERA6 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF223E7ERA6 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 U3.7-201ENST00000363668 216 ntBASIC5.24□□□□□ -1.57
RNF223E7ERA6 RNU6-142P-201ENST00000384019 107 ntBASIC5.24□□□□□ -1.57
RNF223E7ERA6 AC015977.1-201ENST00000418887 292 ntBASIC5.24□□□□□ -1.57
RNF223E7ERA6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 RPL21P66-201ENST00000426566 466 ntBASIC5.24□□□□□ -1.57
RNF223E7ERA6 AL589765.3-201ENST00000446084 462 ntBASIC5.24□□□□□ -1.57
RNF223E7ERA6 AC073581.1-201ENST00000519036 575 ntBASIC5.24□□□□□ -1.57
RNF223E7ERA6 AC016256.1-201ENST00000547971 354 ntBASIC5.24□□□□□ -1.57
RNF223E7ERA6 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 AC083809.1-201ENST00000615051 472 ntBASIC5.24□□□□□ -1.57
RNF223E7ERA6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 AL359195.2-201ENST00000623657 4412 ntBASIC5.24□□□□□ -1.57
RNF223E7ERA6 AC112243.1-201ENST00000623949 3851 ntBASIC5.24□□□□□ -1.57
RNF223E7ERA6 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF223E7ERA6 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RNF223E7ERA6 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RNF223E7ERA6 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RNF223E7ERA6 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.23□□□□□ -1.57
RNF223E7ERA6 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 AC007114.2-201ENST00000576014 4281 ntBASIC5.23□□□□□ -1.57
RNF223E7ERA6 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RNF223E7ERA6 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms