Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL512605.2-201ENST00000592972 256 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AC006272.2-201ENST00000594725 163 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AP000787.2-201ENST00000604432 568 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AL162431.4-201ENST00000604674 411 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AL121917.1-203ENST00000605534 577 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AC008962.1-201ENST00000605729 304 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AC107294.1-201ENST00000609524 467 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 SDR42E1P4-201ENST00000620894 481 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 Z99571.1-201ENST00000636677 394 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AC104260.2-201ENST00000623551 3497 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 AL353796.1-201ENST00000561542 3241 ntBASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PCDHGA11Q9Y5H2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 ZNF299P-201ENST00000406845 1804 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 UBE2L2-201ENST00000254302 429 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 AC092681.1-201ENST00000297369 291 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 RNU6-212P-201ENST00000362642 104 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 RNU4-44P-201ENST00000363050 141 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 RNU6-200P-201ENST00000364743 107 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 U8.8-201ENST00000365399 135 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 RNA5SP30-201ENST00000365552 115 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 Y_RNA.471-201ENST00000384312 102 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR153-1-201ENST00000384914 90 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 GPS2P1-201ENST00000411761 986 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 AL513331.1-201ENST00000411908 397 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 AL133482.1-201ENST00000415988 498 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 AF186996.5-201ENST00000418098 904 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 AL138785.1-201ENST00000425821 331 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 MTND5P15-201ENST00000434246 349 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 RPS17P8-201ENST00000434525 335 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 LINC02210-201ENST00000444561 288 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 RANP8-201ENST00000444720 713 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 KNOP1P3-201ENST00000446933 426 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 AC023424.1-201ENST00000496058 459 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 RNU6-513P-201ENST00000516104 104 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 Y_RNA.673-201ENST00000516306 88 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 RNU6-570P-201ENST00000517051 105 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 AC091144.1-201ENST00000519573 138 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 AL137100.2-201ENST00000555786 315 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 AC005951.2-201ENST00000576282 495 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 AL138895.2-201ENST00000603019 178 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 RMST_4.1-201ENST00000616886 107 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 RN7SL544P-201ENST00000617232 284 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 RN7SL763P-201ENST00000620922 284 ntBASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PCDHGA11Q9Y5H2 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 RPL9P7-201ENST00000330965 580 ntBASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 RNU6-806P-201ENST00000365147 105 ntBASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 SNORA51.8-201ENST00000384234 132 ntBASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 RNU6-33P-201ENST00000384793 107 ntBASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR548M-201ENST00000408260 86 ntBASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 RPL21P91-201ENST00000429231 479 ntBASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.43□□□□□ -1.54
PCDHGA11Q9Y5H2 AL513043.1-201ENST00000439124 535 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms