Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 AC008526.1-201ENST00000509149 338 ntBASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 HMGB1P40-201ENST00000525121 540 ntBASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 CYCSP27-201ENST00000527643 293 ntBASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 MED28P6-201ENST00000558776 231 ntBASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 MIR3921-201ENST00000577308 85 ntBASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 AC002545.1-201ENST00000592511 181 ntBASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 AC020910.2-201ENST00000603635 610 ntBASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 AC020910.3-201ENST00000603701 874 ntBASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 AC109309.2-201ENST00000612597 332 ntBASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 AC099654.2-201ENST00000433031 1980 ntBASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 ZNF519P1-201ENST00000449011 1626 ntBASIC5.05□□□□□ -1.6
VTI1BQ9UEU0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 RPL32P3-201ENST00000359025 275 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 RNU6-692P-201ENST00000384496 107 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 MIR105-1-201ENST00000385222 81 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 RNA5SP339-201ENST00000390987 122 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 RPS4XP7-201ENST00000406274 780 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 MIR1271-201ENST00000408537 86 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 RNU6-370P-201ENST00000411008 104 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 RPL7AP61-201ENST00000443410 636 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 RPL32P28-201ENST00000443577 397 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 AC104634.1-201ENST00000452720 462 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 AC091180.1-201ENST00000462104 372 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 AC117503.1-201ENST00000472241 394 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 NIP7P2-201ENST00000485801 544 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 HMGB3P15-201ENST00000507326 574 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 APOOP4-201ENST00000513530 597 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 Vault.1-201ENST00000516474 102 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 NDUFB4P11-201ENST00000560510 395 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 AL627309.6-201ENST00000606857 840 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 AC084781.2-201ENST00000615568 161 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 NEAT1-202ENST00000501122 22743 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 AC104260.2-201ENST00000623551 3497 ntBASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VTI1BQ9UEU0 AC000123.3-201ENST00000624029 4975 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 UBE2L2-201ENST00000254302 429 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 RNU6-128P-201ENST00000383976 107 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 MTCYBP4-201ENST00000401524 249 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 RN7SKP229-201ENST00000410465 302 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 SNAP23P1-201ENST00000433229 246 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 TXNP1-201ENST00000441872 371 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 AL356981.1-201ENST00000454879 684 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 snoU13.4-201ENST00000458916 104 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 Y_RNA.639-201ENST00000458981 102 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 RNU7-152P-201ENST00000458982 64 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 RN7SL441P-201ENST00000492388 296 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 RPS27P27-201ENST00000498779 255 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 AC009901.1-201ENST00000506703 541 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 RN7SKP46-201ENST00000515942 234 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 SCARNA15.2-201ENST00000516409 127 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 APOOP3-201ENST00000536787 586 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 AL163153.1-201ENST00000554223 283 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 AC012119.1-201ENST00000603184 222 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 IMMP1LP3-201ENST00000604197 224 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 AC107294.1-201ENST00000609524 467 ntBASIC5.03□□□□□ -1.6
VTI1BQ9UEU0 AL355810.1-201ENST00000614629 552 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms