Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC044913.1-201ENST00000557200 430 ntBASIC2.37□□□□□ -2.03
VCX3AQ9NNX9 AC007224.1-201ENST00000564410 144 ntBASIC2.37□□□□□ -2.03
VCX3AQ9NNX9 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.37□□□□□ -2.03
VCX3AQ9NNX9 AC011471.1-201ENST00000585766 187 ntBASIC2.37□□□□□ -2.03
VCX3AQ9NNX9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.37□□□□□ -2.03
VCX3AQ9NNX9 AP001542.2-201ENST00000593141 364 ntBASIC2.37□□□□□ -2.03
VCX3AQ9NNX9 DUXAP10-204ENST00000612052 616 ntBASIC2.37□□□□□ -2.03
VCX3AQ9NNX9 AC004852.3-201ENST00000614131 326 ntBASIC2.37□□□□□ -2.03
VCX3AQ9NNX9 AL354696.1-201ENST00000614652 497 ntBASIC2.37□□□□□ -2.03
VCX3AQ9NNX9 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.37□□□□□ -2.03
VCX3AQ9NNX9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.37□□□□□ -2.03
VCX3AQ9NNX9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
VCX3AQ9NNX9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
VCX3AQ9NNX9 AC000403.1-201ENST00000613696 3585 ntBASIC2.37□□□□□ -2.03
VCX3AQ9NNX9 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
VCX3AQ9NNX9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 MTCO1P4-201ENST00000520516 1409 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 RNU6-76P-201ENST00000384060 104 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 SNORA9-201ENST00000384215 133 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 RPL22P22-201ENST00000395439 379 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 PTGES3P2-201ENST00000407942 482 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 Z85995.1-201ENST00000415547 335 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 NDUFB4P7-201ENST00000423198 363 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AC091286.1-201ENST00000431233 461 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 GTF2IP20-201ENST00000431663 360 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 MTCYBP15-201ENST00000433123 1127 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AC112220.1-201ENST00000434628 355 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AC112653.1-201ENST00000443851 386 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 DDX3P2-201ENST00000446138 111 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 RPS15AP27-201ENST00000449183 343 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 MRPL42P4-201ENST00000453267 443 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 RNU7-23P-201ENST00000459465 62 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AC078857.1-201ENST00000469870 667 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AL049874.1-201ENST00000489560 388 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AC017037.2-201ENST00000513850 890 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AP003467.2-201ENST00000520175 319 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AP003066.2-201ENST00000529375 555 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AC007458.1-201ENST00000542812 373 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 SNORD53-201ENST00000579969 78 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 MIR6840-201ENST00000611937 71 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VCX3AQ9NNX9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 HMGB1P5-201ENST00000255320 642 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AL596028.1-201ENST00000326971 197 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 RNU6-354P-201ENST00000383862 107 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 RNU6-610P-201ENST00000384264 107 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 RNU6-1072P-201ENST00000384703 107 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 RNU6-443P-201ENST00000384780 107 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 RNU6-1300P-201ENST00000391046 108 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 MCTS2P-201ENST00000394552 546 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 RNU6ATAC-201ENST00000408749 126 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 SPA17P1-201ENST00000416656 452 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 MTCO2P17-201ENST00000424336 677 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AL445584.1-201ENST00000431451 330 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AC092393.1-201ENST00000439625 742 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 PGBD4P3-201ENST00000440731 581 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AC011816.1-201ENST00000441346 546 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 Z75741.1-201ENST00000446793 314 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 LARP1BP2-201ENST00000486594 519 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AC090255.1-201ENST00000495779 349 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 EIF4EP3-201ENST00000498782 656 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 MTCYBP17-201ENST00000503579 789 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 PRELID3BP5-201ENST00000508612 460 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 RN7SKP57-201ENST00000517248 293 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AC122134.1-202ENST00000569111 1201 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AC024153.1-201ENST00000603103 365 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AC004853.1-201ENST00000604902 698 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AL023583.1-201ENST00000607518 1143 ntBASIC2.35□□□□□ -2.03
VCX3AQ9NNX9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms