Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 MIR4275-201ENST00000636486 87 ntBASIC3.33□□□□□ -1.88
CPNE1Q99829 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.33□□□□□ -1.88
CPNE1Q99829 AC138915.3-201ENST00000562908 1389 ntBASIC3.33□□□□□ -1.88
CPNE1Q99829 ZNF285B-201ENST00000561698 1767 ntBASIC3.33□□□□□ -1.88
CPNE1Q99829 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CPNE1Q99829 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CPNE1Q99829 DEFB108F-201ENST00000344638 222 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CPNE1Q99829 Y_RNA.560-201ENST00000384689 102 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 U8.14-201ENST00000390843 143 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CPNE1Q99829 EI24P2-201ENST00000397776 1076 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 AL031577.2-201ENST00000404133 280 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 AP000567.1-201ENST00000406413 156 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 SNORA11B-201ENST00000408175 129 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 RNU6-920P-201ENST00000410926 92 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.32□□□□□ -1.88
CPNE1Q99829 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CPNE1Q99829 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.32□□□□□ -1.88
CPNE1Q99829 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.32□□□□□ -1.88
CPNE1Q99829 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.32□□□□□ -1.88
CPNE1Q99829 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CPNE1Q99829 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.32□□□□□ -1.88
CPNE1Q99829 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 AC025518.1-201ENST00000479856 347 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 AC106707.2-201ENST00000484182 374 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.32□□□□□ -1.88
CPNE1Q99829 SCARNA20.6-201ENST00000517251 106 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 IGKV2-26-201ENST00000518305 343 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 HMGN1P28-201ENST00000521340 364 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.32□□□□□ -1.88
CPNE1Q99829 DEFB108D-201ENST00000527787 222 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.32□□□□□ -1.88
CPNE1Q99829 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.32□□□□□ -1.88
CPNE1Q99829 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.32□□□□□ -1.88
CPNE1Q99829 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CPNE1Q99829 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.32□□□□□ -1.88
CPNE1Q99829 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.32□□□□□ -1.88
CPNE1Q99829 AC125611.2-201ENST00000551907 647 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.32□□□□□ -1.88
CPNE1Q99829 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.32□□□□□ -1.88
CPNE1Q99829 AP000403.1-201ENST00000603349 851 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 AL357094.1-201ENST00000603845 844 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 AC025811.1-201ENST00000604312 472 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.32□□□□□ -1.88
CPNE1Q99829 AP002826.1-201ENST00000608835 315 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CPNE1Q99829 AC008443.7-201ENST00000622195 246 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.32□□□□□ -1.88
CPNE1Q99829 AC009093.8-201ENST00000641769 292 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CPNE1Q99829 AC005832.2-201ENST00000538921 1430 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 CCT4P2-201ENST00000233836 1548 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.32□□□□□ -1.88
CPNE1Q99829 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CPNE1Q99829 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.32□□□□□ -1.88
CPNE1Q99829 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.32□□□□□ -1.88
CPNE1Q99829 AC091152.2-201ENST00000591628 2569 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.32□□□□□ -1.88
CPNE1Q99829 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CPNE1Q99829 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CPNE1Q99829 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CPNE1Q99829 AL161912.2-201ENST00000565707 3007 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.31□□□□□ -1.88
CPNE1Q99829 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CPNE1Q99829 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CPNE1Q99829 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.31□□□□□ -1.88
CPNE1Q99829 AC092326.2-201ENST00000624772 1561 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CPNE1Q99829 MTND5P33-201ENST00000571250 1450 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CPNE1Q99829 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CPNE1Q99829 RNU4-35P-201ENST00000362588 141 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CPNE1Q99829 RNU6-76P-201ENST00000384060 104 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 SNORA5A-201ENST00000384111 134 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.31□□□□□ -1.88
CPNE1Q99829 Y_RNA.625-201ENST00000411256 107 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 RNU6-516P-201ENST00000411381 104 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 RAB28P1-201ENST00000411517 641 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AC109780.2-201ENST00000413467 845 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.31□□□□□ -1.88
CPNE1Q99829 HMGB3P23-201ENST00000414981 585 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 HSFY4P-201ENST00000415994 1181 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 SYF2P2-201ENST00000417620 583 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 YPEL5P1-201ENST00000419731 367 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.31□□□□□ -1.88
CPNE1Q99829 Z99497.1-201ENST00000421282 135 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AL389915.1-201ENST00000422463 466 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.31□□□□□ -1.88
CPNE1Q99829 AC109583.1-201ENST00000432156 268 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AC073063.1-201ENST00000434352 607 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 RPL37P21-201ENST00000435890 276 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.31□□□□□ -1.88
CPNE1Q99829 AL512286.1-201ENST00000439244 400 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AC092641.1-201ENST00000440229 772 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 MTND1P26-201ENST00000440488 538 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 RPL26P6-201ENST00000440913 438 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CPNE1Q99829 RPS27P29-201ENST00000463110 252 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms