Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AP001646.1-201ENST00000527936 915 ntBASIC3.66□□□□□ -1.82
LMO3Q8TAP4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 AC007458.1-201ENST00000542812 373 ntBASIC3.66□□□□□ -1.82
LMO3Q8TAP4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 AL359880.1-201ENST00000621879 266 ntBASIC3.66□□□□□ -1.82
LMO3Q8TAP4 AL161637.1-201ENST00000622380 412 ntBASIC3.66□□□□□ -1.82
LMO3Q8TAP4 CR392039.4-201ENST00000624968 501 ntBASIC3.66□□□□□ -1.82
LMO3Q8TAP4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 AL049781.1-201ENST00000623195 3585 ntBASIC3.66□□□□□ -1.82
LMO3Q8TAP4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 FARSBP1-201ENST00000435808 1778 ntBASIC3.66□□□□□ -1.82
LMO3Q8TAP4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.66□□□□□ -1.82
LMO3Q8TAP4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
LMO3Q8TAP4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
LMO3Q8TAP4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LMO3Q8TAP4 AL606537.1-201ENST00000607258 2011 ntBASIC3.65□□□□□ -1.82
LMO3Q8TAP4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LMO3Q8TAP4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 Y_RNA.70-201ENST00000362886 110 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 RNU6-1103P-201ENST00000384150 107 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 Y_RNA.453-201ENST00000384223 109 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 PRRC2CP1-201ENST00000404428 159 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 RNA5SP31-201ENST00000411144 127 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 RPL23AP82-202ENST00000427528 469 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AC023347.2-201ENST00000433994 462 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 UBE2V1P7-201ENST00000446395 340 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AC008264.1-201ENST00000447612 367 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AL162388.1-201ENST00000450912 352 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 MTND3P10-201ENST00000450967 341 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 BTF3P5-201ENST00000457252 467 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 RNU6-1218P-201ENST00000458990 108 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 RPL7P15-201ENST00000461190 712 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 RPL21P13-201ENST00000488305 481 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AC106872.3-201ENST00000495104 446 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 ARL4AP2-201ENST00000507378 601 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AC009646.1-201ENST00000510455 318 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 Y_RNA.702-201ENST00000516843 96 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AP003467.2-201ENST00000520175 319 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AP003122.4-201ENST00000530980 758 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 RPL21P5-201ENST00000554662 472 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AL034351.1-201ENST00000605288 668 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AL353621.2-201ENST00000605340 133 ntBASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LMO3Q8TAP4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AC092079.1-201ENST00000558620 1985 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 U8.3-201ENST00000363321 132 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 RNU6-952P-201ENST00000391164 108 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 MIR320C1-201ENST00000408566 88 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 RN7SKP285-201ENST00000410137 318 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AL356968.1-201ENST00000416622 474 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AC069157.1-201ENST00000421749 137 ntBASIC3.64□□□□□ -1.83
LMO3Q8TAP4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms