Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC018552.3-201ENST00000567416 561 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.64□□□□□ -1.67
SYNE4Q8N205 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.64□□□□□ -1.67
SYNE4Q8N205 HSPE1P14-201ENST00000605812 302 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.64□□□□□ -1.67
SYNE4Q8N205 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.64□□□□□ -1.67
SYNE4Q8N205 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNE4Q8N205 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.64□□□□□ -1.67
SYNE4Q8N205 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNE4Q8N205 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNE4Q8N205 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNE4Q8N205 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SYNE4Q8N205 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SYNE4Q8N205 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.64□□□□□ -1.67
SYNE4Q8N205 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE4Q8N205 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE4Q8N205 RNA5SP52-201ENST00000362448 134 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 RNU6-289P-201ENST00000364093 107 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 Y_RNA.381-201ENST00000365666 102 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 SDCBPP2-201ENST00000424643 885 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 RPS26P47-201ENST00000427219 348 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 TIMM9P3-201ENST00000428659 274 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 RPL31P35-201ENST00000431058 377 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 C1DP4-201ENST00000455429 424 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC097493.1-201ENST00000463958 372 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC023598.1-201ENST00000472521 361 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 AL136126.1-201ENST00000473603 402 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC017015.1-201ENST00000477387 286 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 MTND1P3-201ENST00000484956 952 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 AF235103.2-201ENST00000525753 346 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 HPRT1P3-201ENST00000539521 576 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC069240.1-201ENST00000548774 375 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 AL133457.1-201ENST00000564251 987 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC025678.1-201ENST00000567861 338 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 RPS3AP23-202ENST00000574601 686 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 AP001180.3-201ENST00000582221 145 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE4Q8N205 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE4Q8N205 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC138915.3-201ENST00000562908 1389 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SYNE4Q8N205 AC083843.3-201ENST00000623679 2186 ntBASIC4.63□□□□□ -1.67
SYNE4Q8N205 XPOTP1-201ENST00000443317 2398 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE4Q8N205 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 RNU6-984P-201ENST00000363236 109 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 RNU6-282P-201ENST00000365357 103 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 RNU6-1103P-201ENST00000384150 107 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 RNU6-769P-201ENST00000384407 104 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 MT-TD-201ENST00000387419 68 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 AC009302.1-201ENST00000417147 390 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 AL589872.1-201ENST00000426602 288 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 RABEPKP1-201ENST00000440529 1026 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 HMGN3P1-201ENST00000453847 193 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SYNE4Q8N205 RN7SL601P-201ENST00000471221 293 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 KLRA1P-201ENST00000503499 986 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 FTH1P24-201ENST00000503502 462 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 KCTD9P5-201ENST00000504141 1170 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 AC093809.1-201ENST00000509155 340 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 AP003467.2-201ENST00000520175 319 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 AP003181.2-201ENST00000528941 181 ntBASIC4.62□□□□□ -1.67
SYNE4Q8N205 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.62□□□□□ -1.67
SYNE4Q8N205 SULT1C2P1-202ENST00000562418 459 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms