Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 AC026427.2-201ENST00000506228 536 ntBASIC5.54□□□□□ -1.52
USP31Q70CQ4 AC017037.2-201ENST00000513850 890 ntBASIC5.54□□□□□ -1.52
USP31Q70CQ4 SUB1P1-201ENST00000524415 382 ntBASIC5.54□□□□□ -1.52
USP31Q70CQ4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USP31Q70CQ4 AC068587.5-201ENST00000528506 175 ntBASIC5.54□□□□□ -1.52
USP31Q70CQ4 AC107918.3-201ENST00000533272 382 ntBASIC5.54□□□□□ -1.52
USP31Q70CQ4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.54□□□□□ -1.52
USP31Q70CQ4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.54□□□□□ -1.52
USP31Q70CQ4 AC011611.1-201ENST00000552179 197 ntBASIC5.54□□□□□ -1.52
USP31Q70CQ4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.54□□□□□ -1.52
USP31Q70CQ4 AL133153.1-201ENST00000557756 303 ntBASIC5.54□□□□□ -1.52
USP31Q70CQ4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.54□□□□□ -1.52
USP31Q70CQ4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.54□□□□□ -1.52
USP31Q70CQ4 AC007687.1-201ENST00000602704 304 ntBASIC5.54□□□□□ -1.52
USP31Q70CQ4 AL592436.1-201ENST00000605135 558 ntBASIC5.54□□□□□ -1.52
USP31Q70CQ4 AL121992.2-201ENST00000606262 256 ntBASIC5.54□□□□□ -1.52
USP31Q70CQ4 AL354798.1-201ENST00000622505 329 ntBASIC5.54□□□□□ -1.52
USP31Q70CQ4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
USP31Q70CQ4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
USP31Q70CQ4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP31Q70CQ4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP31Q70CQ4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP31Q70CQ4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP31Q70CQ4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP31Q70CQ4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP31Q70CQ4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP31Q70CQ4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
USP31Q70CQ4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP31Q70CQ4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP31Q70CQ4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
USP31Q70CQ4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
USP31Q70CQ4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP31Q70CQ4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.53□□□□□ -1.52
USP31Q70CQ4 AC011155.1-201ENST00000316512 456 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 AC073343.1-201ENST00000328239 651 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 PTMAP2-201ENST00000397627 327 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.53□□□□□ -1.52
USP31Q70CQ4 DUTP6-201ENST00000425573 462 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 OR2AS1P-201ENST00000427827 319 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 NOTCH2P1-201ENST00000443481 624 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 PTMAP3-201ENST00000447474 330 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 AC073415.1-201ENST00000449240 153 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 RPS11P1-201ENST00000451072 473 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 RPL7L1P8-201ENST00000469911 741 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 AC110792.1-201ENST00000491826 472 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 DEFB109F-201ENST00000491870 277 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 RNU7-30P-201ENST00000516835 62 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 RN7SKP116-201ENST00000516902 319 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 BTF3P12-201ENST00000519620 469 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 FAM60DP-201ENST00000524174 632 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.53□□□□□ -1.52
USP31Q70CQ4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.53□□□□□ -1.52
USP31Q70CQ4 AC120057.2-201ENST00000571520 271 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.53□□□□□ -1.52
USP31Q70CQ4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP31Q70CQ4 AL603758.1-201ENST00000618654 241 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 AC009248.2-201ENST00000619826 254 ntBASIC5.53□□□□□ -1.52
USP31Q70CQ4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP31Q70CQ4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP31Q70CQ4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP31Q70CQ4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP31Q70CQ4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP31Q70CQ4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP31Q70CQ4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 PCAT14-202ENST00000627127 3935 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 Y_RNA.493-201ENST00000384422 102 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 RNU6-821P-201ENST00000390995 107 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 SRIP2-201ENST00000428470 166 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 TAAR7P-201ENST00000436141 242 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 HMGB3P21-201ENST00000452483 547 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 AC234775.1-201ENST00000454247 670 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 RNU4-29P-201ENST00000515943 174 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 PSMA2P1-201ENST00000526365 646 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USP31Q70CQ4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USP31Q70CQ4 CR383656.7-201ENST00000548164 174 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 AC078814.3-201ENST00000553036 491 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 AC078795.3-201ENST00000602913 472 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 uc_338.5-201ENST00000611839 155 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 AC064801.1-201ENST00000612025 407 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 AL121772.2-201ENST00000614331 297 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 U6.114-201ENST00000636407 96 ntBASIC5.52□□□□□ -1.53
USP31Q70CQ4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.52□□□□□ -1.53
USP31Q70CQ4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms