Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 AL138713.1-201ENST00000624026 2130 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.62□□□□□ -1.51
PRPF40BQ6NWY9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 MIR383-201ENST00000362257 73 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 RNU6-179P-201ENST00000363350 107 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 RNU6-254P-201ENST00000363377 107 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 SNORA63C-201ENST00000364578 129 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 SNORD42.2-201ENST00000365570 69 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 Y_RNA.414-201ENST00000384011 101 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 EIF2AP4-201ENST00000424793 1781 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 TAB3P1-202ENST00000452645 1634 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 SNRPFP3-201ENST00000457792 225 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 Y_RNA.639-201ENST00000458981 102 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 snoU13.22-201ENST00000459428 104 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 RNA5SP103-201ENST00000459503 118 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 AC092436.1-201ENST00000506450 503 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 IGLVIV-53-201ENST00000520107 367 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 AP000857.1-201ENST00000532151 543 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 TRAV8-5-201ENST00000537369 341 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 ELOCP31-201ENST00000540463 467 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 MIR4775-201ENST00000581168 75 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 POLR3GP2-201ENST00000588366 668 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 AC006116.10-201ENST00000591836 581 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 APOOP1-201ENST00000604695 592 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 AC020634.1-201ENST00000608701 549 ntBASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.61□□□□□ -1.51
PRPF40BQ6NWY9 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 NXPH1-205ENST00000602349 1953 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 MIR372-201ENST00000362225 67 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 RNU6-474P-201ENST00000384243 107 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 RPL23AP38-201ENST00000423801 469 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 AC107399.1-201ENST00000451226 265 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 MTND1P9-201ENST00000453775 944 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 FGF7P3-201ENST00000454645 303 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 AL445433.1-201ENST00000457507 257 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 RN7SL542P-201ENST00000467147 294 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 AC053481.1-201ENST00000467217 306 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 Y_RNA.718-201ENST00000517110 102 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 AP005435.4-201ENST00000529514 284 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 AP000763.2-201ENST00000540641 163 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 AC015912.2-201ENST00000571053 181 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 MIR3158-1-201ENST00000583596 81 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 uc_338.34-201ENST00000617467 174 ntBASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRPF40BQ6NWY9 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRPF40BQ6NWY9 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms