Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 USP9YP28-201ENST00000435142 589 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 AL138787.1-202ENST00000437804 898 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.1□□□□□ -1.91
COL16A1Q07092 AL162388.1-201ENST00000450912 352 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.1□□□□□ -1.91
COL16A1Q07092 AC091951.3-201ENST00000504093 246 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 AC091435.1-201ENST00000505442 584 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 RN7SKP34-201ENST00000516142 244 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.1□□□□□ -1.91
COL16A1Q07092 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.1□□□□□ -1.91
COL16A1Q07092 AC092851.1-201ENST00000535964 478 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.1□□□□□ -1.91
COL16A1Q07092 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.1□□□□□ -1.91
COL16A1Q07092 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.1□□□□□ -1.91
COL16A1Q07092 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.1□□□□□ -1.91
COL16A1Q07092 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
COL16A1Q07092 AC012254.4-201ENST00000588843 273 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.1□□□□□ -1.91
COL16A1Q07092 AP002906.1-201ENST00000603405 233 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 AC079610.2-201ENST00000604818 690 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 AC016877.3-201ENST00000606778 504 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 AC245008.1-201ENST00000608123 476 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 AC103710.1-201ENST00000610003 901 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 AC092106.3-201ENST00000611308 722 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 AC090116.1-201ENST00000615679 446 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 AC009318.3-201ENST00000616916 503 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 AC010975.3-201ENST00000618727 978 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 AC098679.4-201ENST00000624241 654 ntBASIC3.1□□□□□ -1.91
COL16A1Q07092 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL16A1Q07092 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
COL16A1Q07092 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL16A1Q07092 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
COL16A1Q07092 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
COL16A1Q07092 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COL16A1Q07092 AC093909.5-201ENST00000621839 1799 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 DDX43P2-201ENST00000604753 1354 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 AC009487.4-201ENST00000624969 3585 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
COL16A1Q07092 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
COL16A1Q07092 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
COL16A1Q07092 Y_RNA.472-201ENST00000384322 102 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 RNU6-932P-201ENST00000391108 106 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 HMGB1P10-201ENST00000395823 563 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 AL591416.1-201ENST00000404015 867 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.09□□□□□ -1.91
COL16A1Q07092 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.09□□□□□ -1.91
COL16A1Q07092 AC246680.2-201ENST00000422106 389 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 FO393419.3-201ENST00000428741 282 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.09□□□□□ -1.91
COL16A1Q07092 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.09□□□□□ -1.91
COL16A1Q07092 AC084290.1-201ENST00000434995 374 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.09□□□□□ -1.91
COL16A1Q07092 OR51B8P-201ENST00000449892 769 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 RPL5P13-201ENST00000462840 709 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.09□□□□□ -1.91
COL16A1Q07092 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.09□□□□□ -1.91
COL16A1Q07092 AC009094.1-201ENST00000564443 426 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.09□□□□□ -1.91
COL16A1Q07092 AC021171.1-201ENST00000603137 706 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 AL035411.2-201ENST00000604022 421 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.09□□□□□ -1.91
COL16A1Q07092 AL391813.2-201ENST00000609113 322 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.09□□□□□ -1.91
COL16A1Q07092 MIR6715B-201ENST00000637172 77 ntBASIC3.09□□□□□ -1.91
COL16A1Q07092 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COL16A1Q07092 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL16A1Q07092 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
COL16A1Q07092 AL390862.1-201ENST00000635467 1469 ntBASIC3.09□□□□□ -1.92
COL16A1Q07092 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.09□□□□□ -1.92
COL16A1Q07092 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
COL16A1Q07092 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
COL16A1Q07092 SNORD116-9-201ENST00000384000 95 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 SNORD116-3-201ENST00000384287 95 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 SNORD116-7-201ENST00000384404 95 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 SNORD116-5-201ENST00000384462 95 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AL590004.2-201ENST00000404787 371 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 MIR1302-8-201ENST00000408342 128 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.08□□□□□ -1.92
COL16A1Q07092 AC092638.1-201ENST00000411966 1275 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AL356320.2-201ENST00000417263 507 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.08□□□□□ -1.92
COL16A1Q07092 SEPT2P1-201ENST00000419651 180 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AC234781.2-201ENST00000426370 994 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 MTCYBP29-201ENST00000436327 1006 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 PTGES3P1-201ENST00000439531 483 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.08□□□□□ -1.92
COL16A1Q07092 EXTL2P1-201ENST00000446218 416 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 PTENP1-201ENST00000447117 1215 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.08□□□□□ -1.92
COL16A1Q07092 GTF2IP12-201ENST00000456547 356 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.08□□□□□ -1.92
COL16A1Q07092 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
COL16A1Q07092 AC034244.1-201ENST00000507687 207 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.08□□□□□ -1.92
COL16A1Q07092 AC108120.2-201ENST00000512973 294 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 AC117532.1-201ENST00000514638 323 ntBASIC3.08□□□□□ -1.92
COL16A1Q07092 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.08□□□□□ -1.92
COL16A1Q07092 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms