Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCL20P78556 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCL20P78556 SNORA68.1-201ENST00000364537 132 ntBASIC1.81□□□□□ -2.12
CCL20P78556 RNA5SP138-201ENST00000365098 114 ntBASIC1.81□□□□□ -2.12
CCL20P78556 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CCL20P78556 MIR135A2-201ENST00000384854 100 ntBASIC1.81□□□□□ -2.12
CCL20P78556 AL122016.1-201ENST00000403365 367 ntBASIC1.81□□□□□ -2.12
CCL20P78556 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCL20P78556 FCF1P2-201ENST00000415284 583 ntBASIC1.81□□□□□ -2.12
CCL20P78556 VN1R42P-201ENST00000424651 344 ntBASIC1.81□□□□□ -2.12
CCL20P78556 RPL35AP12-201ENST00000425362 338 ntBASIC1.81□□□□□ -2.12
CCL20P78556 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.81□□□□□ -2.12
CCL20P78556 UBE2V1P13-201ENST00000436983 439 ntBASIC1.81□□□□□ -2.12
CCL20P78556 FGF7P5-201ENST00000441829 291 ntBASIC1.81□□□□□ -2.12
CCL20P78556 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC1.81□□□□□ -2.12
CCL20P78556 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.81□□□□□ -2.12
CCL20P78556 RNU7-23P-201ENST00000459465 62 ntBASIC1.81□□□□□ -2.12
CCL20P78556 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.81□□□□□ -2.12
CCL20P78556 LINC00888-204ENST00000487386 421 ntBASIC1.81□□□□□ -2.12
CCL20P78556 FAM172BP-201ENST00000487497 1089 ntBASIC1.81□□□□□ -2.12
CCL20P78556 MTCYBP17-201ENST00000503579 789 ntBASIC1.81□□□□□ -2.12
CCL20P78556 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.81□□□□□ -2.12
CCL20P78556 AC114322.1-201ENST00000506771 926 ntBASIC1.81□□□□□ -2.12
CCL20P78556 AC113420.1-201ENST00000507903 571 ntBASIC1.81□□□□□ -2.12
CCL20P78556 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.81□□□□□ -2.12
CCL20P78556 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.81□□□□□ -2.12
CCL20P78556 AC025755.1-201ENST00000521306 278 ntBASIC1.81□□□□□ -2.12
CCL20P78556 ATP5F1P5-201ENST00000526403 760 ntBASIC1.81□□□□□ -2.12
CCL20P78556 CR383656.7-201ENST00000548164 174 ntBASIC1.81□□□□□ -2.12
CCL20P78556 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.81□□□□□ -2.12
CCL20P78556 AC104229.1-201ENST00000561364 255 ntBASIC1.81□□□□□ -2.12
CCL20P78556 AL031176.1-201ENST00000604554 466 ntBASIC1.81□□□□□ -2.12
CCL20P78556 AL450270.1-201ENST00000606160 391 ntBASIC1.81□□□□□ -2.12
CCL20P78556 AL592148.2-201ENST00000612210 372 ntBASIC1.81□□□□□ -2.12
CCL20P78556 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CCL20P78556 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCL20P78556 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CCL20P78556 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CCL20P78556 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCL20P78556 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.8□□□□□ -2.12
CCL20P78556 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
CCL20P78556 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CCL20P78556 RNU6-251P-201ENST00000363235 104 ntBASIC1.8□□□□□ -2.12
CCL20P78556 RNU4-52P-201ENST00000384209 138 ntBASIC1.8□□□□□ -2.12
CCL20P78556 MIR27B-201ENST00000385129 97 ntBASIC1.8□□□□□ -2.12
CCL20P78556 MIR325-201ENST00000385260 98 ntBASIC1.8□□□□□ -2.12
CCL20P78556 MIR1193-201ENST00000408109 78 ntBASIC1.8□□□□□ -2.12
CCL20P78556 RNU2-43P-201ENST00000410306 190 ntBASIC1.8□□□□□ -2.12
CCL20P78556 RPL36AP36-201ENST00000418616 301 ntBASIC1.8□□□□□ -2.12
CCL20P78556 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.8□□□□□ -2.12
CCL20P78556 Z82209.1-201ENST00000422141 2135 ntBASIC1.8□□□□□ -2.12
CCL20P78556 CR848007.2-201ENST00000424918 787 ntBASIC1.8□□□□□ -2.12
CCL20P78556 AC098614.2-201ENST00000426040 255 ntBASIC1.8□□□□□ -2.12
CCL20P78556 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
CCL20P78556 RPS15AP28-201ENST00000435088 386 ntBASIC1.8□□□□□ -2.12
CCL20P78556 AC002542.1-201ENST00000440683 193 ntBASIC1.8□□□□□ -2.12
CCL20P78556 RNFT1P2-201ENST00000443064 757 ntBASIC1.8□□□□□ -2.12
CCL20P78556 AL135938.1-201ENST00000443141 297 ntBASIC1.8□□□□□ -2.12
CCL20P78556 AL671855.1-201ENST00000446875 1203 ntBASIC1.8□□□□□ -2.12
CCL20P78556 AL050341.1-201ENST00000447743 313 ntBASIC1.8□□□□□ -2.12
CCL20P78556 RPL23AP7-203ENST00000449021 469 ntBASIC1.8□□□□□ -2.12
CCL20P78556 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.8□□□□□ -2.12
CCL20P78556 RBM43P1-201ENST00000476891 1081 ntBASIC1.8□□□□□ -2.12
CCL20P78556 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.8□□□□□ -2.12
CCL20P78556 RPL23AP49-201ENST00000492925 468 ntBASIC1.8□□□□□ -2.12
CCL20P78556 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.8□□□□□ -2.12
CCL20P78556 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.8□□□□□ -2.12
CCL20P78556 XKRY-201ENST00000510392 1100 ntBASIC1.8□□□□□ -2.12
CCL20P78556 AC026436.1-201ENST00000510537 270 ntBASIC1.8□□□□□ -2.12
CCL20P78556 HMGB1P1-201ENST00000522557 636 ntBASIC1.8□□□□□ -2.12
CCL20P78556 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.8□□□□□ -2.12
CCL20P78556 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.8□□□□□ -2.12
CCL20P78556 SETP7-201ENST00000552169 453 ntBASIC1.8□□□□□ -2.12
CCL20P78556 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.8□□□□□ -2.12
CCL20P78556 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.8□□□□□ -2.12
CCL20P78556 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.8□□□□□ -2.12
CCL20P78556 AC105137.2-201ENST00000569073 466 ntBASIC1.8□□□□□ -2.12
CCL20P78556 AC005498.1-201ENST00000592125 465 ntBASIC1.8□□□□□ -2.12
CCL20P78556 AL355877.2-201ENST00000603670 358 ntBASIC1.8□□□□□ -2.12
CCL20P78556 YPEL5P2-201ENST00000605553 359 ntBASIC1.8□□□□□ -2.12
CCL20P78556 AC013562.2-201ENST00000611632 603 ntBASIC1.8□□□□□ -2.12
CCL20P78556 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.8□□□□□ -2.12
CCL20P78556 HMGB1P24-202ENST00000615653 685 ntBASIC1.8□□□□□ -2.12
CCL20P78556 AC006213.4-201ENST00000616184 634 ntBASIC1.8□□□□□ -2.12
CCL20P78556 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.8□□□□□ -2.12
CCL20P78556 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC1.8□□□□□ -2.12
CCL20P78556 POMP-202ENST00000460403 1428 ntTSL 3 BASIC1.8□□□□□ -2.12
CCL20P78556 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCL20P78556 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCL20P78556 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.8□□□□□ -2.12
CCL20P78556 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CCL20P78556 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.79□□□□□ -2.12
CCL20P78556 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.79□□□□□ -2.12
CCL20P78556 SNORD116-23-201ENST00000384645 92 ntBASIC1.79□□□□□ -2.12
CCL20P78556 NPM1P10-201ENST00000398310 865 ntBASIC1.79□□□□□ -2.12
CCL20P78556 MORF4L1P6-201ENST00000418771 268 ntBASIC1.79□□□□□ -2.12
CCL20P78556 AC099548.1-201ENST00000421443 426 ntBASIC1.79□□□□□ -2.12
CCL20P78556 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.79□□□□□ -2.12
CCL20P78556 RPL7P44-201ENST00000424827 742 ntBASIC1.79□□□□□ -2.12
CCL20P78556 GTF2IP20-201ENST00000431663 360 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms