Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RNU1-13P-201ENST00000384499 162 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 MIR124-3-201ENST00000384866 87 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 RNU6-876P-201ENST00000391295 104 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 RPL23AP32-201ENST00000395315 459 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.52□□□□□ -1.85
SEC61A1P61619 AC092832.1-201ENST00000422934 400 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.52□□□□□ -1.85
SEC61A1P61619 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.52□□□□□ -1.85
SEC61A1P61619 SNRPEP8-201ENST00000442866 260 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.52□□□□□ -1.85
SEC61A1P61619 AC132479.1-201ENST00000449160 144 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.52□□□□□ -1.85
SEC61A1P61619 MTND2P24-201ENST00000453434 806 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
SEC61A1P61619 RPS27AP13-201ENST00000498403 237 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SEC61A1P61619 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.52□□□□□ -1.85
SEC61A1P61619 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.52□□□□□ -1.85
SEC61A1P61619 Vault.3-201ENST00000516676 95 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.52□□□□□ -1.85
SEC61A1P61619 AC135001.1-201ENST00000544546 283 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.52□□□□□ -1.85
SEC61A1P61619 SUB1P2-201ENST00000556401 297 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.52□□□□□ -1.85
SEC61A1P61619 AL356432.3-201ENST00000568952 465 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 MIR3160-1-201ENST00000577972 85 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.52□□□□□ -1.85
SEC61A1P61619 AC005730.3-201ENST00000583067 366 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.52□□□□□ -1.85
SEC61A1P61619 UBE2L4-201ENST00000587688 464 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.52□□□□□ -1.85
SEC61A1P61619 AC011468.4-201ENST00000603942 409 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 AL451044.1-201ENST00000604867 238 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 AC008277.2-201ENST00000605196 797 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 BX664608.1-201ENST00000610519 487 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SEC61A1P61619 AL359314.1-201ENST00000616913 261 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.52□□□□□ -1.85
SEC61A1P61619 AC012150.2-201ENST00000621300 544 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 AL158801.5-201ENST00000623123 465 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 MTND5P33-201ENST00000571250 1450 ntBASIC3.52□□□□□ -1.85
SEC61A1P61619 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SEC61A1P61619 CASC19-280ENST00000642102 1351 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
SEC61A1P61619 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SEC61A1P61619 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SEC61A1P61619 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SEC61A1P61619 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SEC61A1P61619 MIR372-201ENST00000362225 67 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 RNU6-97P-201ENST00000363387 104 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 RNU6-1085P-201ENST00000363576 107 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 RNU6-534P-201ENST00000364877 106 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 RNU6-1103P-201ENST00000384150 107 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 AC068050.1-201ENST00000394891 380 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SEC61A1P61619 HMGB3P20-201ENST00000417997 600 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 AL139413.1-201ENST00000421309 217 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.51□□□□□ -1.85
SEC61A1P61619 AC006548.1-201ENST00000427470 102 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.51□□□□□ -1.85
SEC61A1P61619 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.51□□□□□ -1.85
SEC61A1P61619 AL049734.2-201ENST00000441066 616 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.51□□□□□ -1.85
SEC61A1P61619 NDUFS5P3-201ENST00000450668 321 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 RPL36AP13-201ENST00000457490 317 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 HMGB1P25-201ENST00000468402 607 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.51□□□□□ -1.85
SEC61A1P61619 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.51□□□□□ -1.85
SEC61A1P61619 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.51□□□□□ -1.85
SEC61A1P61619 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.51□□□□□ -1.85
SEC61A1P61619 AC021146.1-201ENST00000511202 716 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 NPM1P41-201ENST00000512920 831 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.51□□□□□ -1.85
SEC61A1P61619 RNA5SP73-201ENST00000516744 108 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 RN7SKP116-201ENST00000516902 319 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.51□□□□□ -1.85
SEC61A1P61619 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.51□□□□□ -1.85
SEC61A1P61619 AP000907.2-201ENST00000530827 353 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 MIR3167-201ENST00000579623 85 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.51□□□□□ -1.85
SEC61A1P61619 AC060771.1-201ENST00000582031 164 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.51□□□□□ -1.85
SEC61A1P61619 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.51□□□□□ -1.85
SEC61A1P61619 BNIP3P33-201ENST00000598912 569 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 AC012507.3-201ENST00000603556 477 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 AC104662.1-201ENST00000604448 511 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 DUXAP9-208ENST00000622815 614 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 AC022140.2-201ENST00000623500 188 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 AC005609.4-201ENST00000625071 447 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 CR381572.1-201ENST00000625098 102 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 AL773545.4-201ENST00000637262 310 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.51□□□□□ -1.85
SEC61A1P61619 MIR492-201ENST00000638676 116 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 AL513478.4-201ENST00000641636 310 ntBASIC3.51□□□□□ -1.85
SEC61A1P61619 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.51□□□□□ -1.85
SEC61A1P61619 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.51□□□□□ -1.85
SEC61A1P61619 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SEC61A1P61619 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SEC61A1P61619 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SEC61A1P61619 AC073544.1-201ENST00000600110 1595 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms