Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC010300.1-201ENST00000600671 5134 ntBASIC4.34□□□□□ -1.72
WNT3AP56704 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.33□□□□□ -1.72
WNT3AP56704 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
WNT3AP56704 DDX18P3-201ENST00000404856 2007 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
WNT3AP56704 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.33□□□□□ -1.72
WNT3AP56704 AC104118.1-201ENST00000607625 1589 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
WNT3AP56704 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
WNT3AP56704 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
WNT3AP56704 AL157831.1-201ENST00000426134 473 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 DNAJC19P7-201ENST00000428811 344 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 RPL29P29-201ENST00000448725 423 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.33□□□□□ -1.72
WNT3AP56704 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.33□□□□□ -1.72
WNT3AP56704 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.33□□□□□ -1.72
WNT3AP56704 HMGB1P25-201ENST00000468402 607 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 AC108145.1-201ENST00000503770 153 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.33□□□□□ -1.72
WNT3AP56704 FGF7P4-201ENST00000509595 295 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 PPBPP1-201ENST00000510807 373 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 AC112206.3-201ENST00000514578 389 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 NARSP2-201ENST00000518524 679 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.33□□□□□ -1.72
WNT3AP56704 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.33□□□□□ -1.72
WNT3AP56704 AC005668.1-201ENST00000571142 476 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 MTND6P33-201ENST00000571794 183 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 AL355375.2-201ENST00000574825 175 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 AC007687.1-201ENST00000602704 304 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 LLPHP1-201ENST00000603571 367 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 AL050343.2-201ENST00000607338 280 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 TPTEP1-208ENST00000636884 213 ntBASIC4.33□□□□□ -1.72
WNT3AP56704 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
WNT3AP56704 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
WNT3AP56704 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
WNT3AP56704 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.33□□□□□ -1.72
WNT3AP56704 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
WNT3AP56704 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
WNT3AP56704 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
WNT3AP56704 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.32□□□□□ -1.72
WNT3AP56704 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
WNT3AP56704 AL158163.1-201ENST00000603915 1649 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
WNT3AP56704 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
WNT3AP56704 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
WNT3AP56704 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.32□□□□□ -1.72
WNT3AP56704 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
WNT3AP56704 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
WNT3AP56704 Y_RNA.67-201ENST00000362870 100 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 Y_RNA.166-201ENST00000363730 102 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 RNU6-188P-201ENST00000364207 107 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 RNU6-637P-201ENST00000384050 107 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 RNU6-356P-201ENST00000384140 107 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
WNT3AP56704 RNA5SP36-201ENST00000410197 133 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 RNA5SP56-201ENST00000410277 118 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 NDUFB4P5-201ENST00000415445 361 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 UBE2FP1-201ENST00000416536 447 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.32□□□□□ -1.72
WNT3AP56704 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.32□□□□□ -1.72
WNT3AP56704 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.32□□□□□ -1.72
WNT3AP56704 RPL23AP33-201ENST00000442301 452 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 AL590399.6-201ENST00000446396 307 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.32□□□□□ -1.72
WNT3AP56704 RPL23AP81-201ENST00000455252 467 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.32□□□□□ -1.72
WNT3AP56704 RNU7-182P-201ENST00000459009 62 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 MRPS17P3-201ENST00000465453 385 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 AC011276.1-201ENST00000469688 323 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 AC007537.2-201ENST00000472093 511 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 AC126389.1-201ENST00000477436 290 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 RPL21P103-201ENST00000479921 488 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.32□□□□□ -1.72
WNT3AP56704 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
WNT3AP56704 RPS15AP36-201ENST00000492022 382 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 AC105417.1-201ENST00000514691 285 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.32□□□□□ -1.72
WNT3AP56704 SCARNA15.1-201ENST00000516384 125 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 DEFB108D-201ENST00000527787 222 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 OR5BN1P-201ENST00000532955 829 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.32□□□□□ -1.72
WNT3AP56704 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.32□□□□□ -1.72
WNT3AP56704 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
WNT3AP56704 SCOCP1-201ENST00000554676 349 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.32□□□□□ -1.72
WNT3AP56704 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.32□□□□□ -1.72
WNT3AP56704 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.32□□□□□ -1.72
WNT3AP56704 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.32□□□□□ -1.72
WNT3AP56704 AC078795.3-201ENST00000602913 472 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 AC079684.1-201ENST00000621405 437 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 AC008013.2-202ENST00000637965 364 ntBASIC4.32□□□□□ -1.72
WNT3AP56704 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.32□□□□□ -1.72
WNT3AP56704 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.32□□□□□ -1.72
WNT3AP56704 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
WNT3AP56704 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
WNT3AP56704 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
WNT3AP56704 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
WNT3AP56704 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
WNT3AP56704 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
WNT3AP56704 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms