Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.2□□□□□ -1.9
HMGCS2P54868 AC010198.2-201ENST00000550612 259 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS2P54868 AC136601.2-201ENST00000604356 474 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 AC069304.2-201ENST00000605154 435 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 AC004832.5-201ENST00000608677 401 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 MIR6817-201ENST00000615588 66 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 MIR6715A-201ENST00000615929 79 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 AP000484.1-201ENST00000620067 1252 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.2□□□□□ -1.9
HMGCS2P54868 AC116618.1-201ENST00000634617 774 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 AC138915.3-201ENST00000562908 1389 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 AC091152.2-201ENST00000591628 2569 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGCS2P54868 AL359893.1-201ENST00000447628 1580 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.2□□□□□ -1.9
HMGCS2P54868 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.2□□□□□ -1.9
HMGCS2P54868 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMGCS2P54868 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGCS2P54868 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGCS2P54868 RNU1-35P-201ENST00000362782 153 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 RNA5SP68-201ENST00000363885 119 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGCS2P54868 AL356057.3-201ENST00000402607 340 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 MIR1261-201ENST00000408659 82 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS2P54868 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 AC005005.2-201ENST00000420779 380 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGCS2P54868 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGCS2P54868 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS2P54868 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS2P54868 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGCS2P54868 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS2P54868 RNU7-170P-201ENST00000459303 61 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 AC068587.2-201ENST00000478386 781 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGCS2P54868 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGCS2P54868 KLRA1P-201ENST00000503499 986 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 HMGB3P15-201ENST00000507326 574 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 MTCO2P32-201ENST00000514865 403 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS2P54868 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS2P54868 HIGD1AP10-201ENST00000527837 282 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGCS2P54868 PDCL2P2-201ENST00000533651 189 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 HPRT1P3-201ENST00000539521 576 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 AC092470.1-201ENST00000546187 132 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 SYF2P1-201ENST00000550658 413 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 HIGD1AP17-201ENST00000554576 276 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGCS2P54868 OR4K7P-201ENST00000580232 945 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS2P54868 AL590282.1-201ENST00000610379 1136 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 AC097478.2-201ENST00000610572 514 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 AL450489.1-201ENST00000612071 468 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 AC008121.2-201ENST00000614647 523 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGCS2P54868 AC068722.2-201ENST00000618734 544 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
HMGCS2P54868 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGCS2P54868 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGCS2P54868 AC092608.2-201ENST00000624427 218 ntBASIC3.19□□□□□ -1.9
HMGCS2P54868 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HMGCS2P54868 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGCS2P54868 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGCS2P54868 AC004972.1-201ENST00000623934 2209 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 FAM133CP-201ENST00000332869 704 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
HMGCS2P54868 Y_RNA.25-201ENST00000362528 102 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGCS2P54868 MIR506-201ENST00000384998 124 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 AC119751.3-201ENST00000399720 670 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 RN7SKP58-201ENST00000411010 305 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 AC010099.3-201ENST00000423896 409 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCS2P54868 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGCS2P54868 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCS2P54868 MTCO1P48-201ENST00000448024 1096 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 MTND1P31-201ENST00000449206 961 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 UQCRHP3-201ENST00000451503 251 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGCS2P54868 HMGN2P16-201ENST00000456802 261 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 RPL21P41-201ENST00000459863 264 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 AC008481.1-201ENST00000463278 396 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 RPL23AP14-201ENST00000468281 468 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGCS2P54868 HMGB1P28-201ENST00000507778 552 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGCS2P54868 RNA5SP148-201ENST00000516527 94 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 DUXAP5-201ENST00000529668 529 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGCS2P54868 AC125611.1-201ENST00000549563 229 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 DUXAP1-201ENST00000556632 463 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 AC009094.1-201ENST00000564443 426 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 LARP7P2-201ENST00000575306 125 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
HMGCS2P54868 ZNF861P-201ENST00000588126 639 ntBASIC3.18□□□□□ -1.9
HMGCS2P54868 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCS2P54868 MIR1322-201ENST00000638013 71 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms