Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.44□□□□□ -1.86
PTPN3P26045 AP000542.1-201ENST00000448473 371 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.44□□□□□ -1.86
PTPN3P26045 SETP11-201ENST00000473027 690 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AL049830.2-201ENST00000480072 201 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.44□□□□□ -1.86
PTPN3P26045 HMGB1P36-201ENST00000487709 576 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AC010486.3-201ENST00000511602 785 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.44□□□□□ -1.86
PTPN3P26045 AC118465.1-201ENST00000513820 1271 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AC034159.1-201ENST00000513885 583 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AC022483.1-201ENST00000514020 567 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.44□□□□□ -1.86
PTPN3P26045 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.44□□□□□ -1.86
PTPN3P26045 RPL12P22-201ENST00000519073 490 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AC022690.1-201ENST00000526681 550 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AP004247.1-201ENST00000531556 1289 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.44□□□□□ -1.86
PTPN3P26045 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.44□□□□□ -1.86
PTPN3P26045 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.44□□□□□ -1.86
PTPN3P26045 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.44□□□□□ -1.86
PTPN3P26045 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.44□□□□□ -1.86
PTPN3P26045 OR4K8P-201ENST00000578842 1048 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.44□□□□□ -1.86
PTPN3P26045 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.44□□□□□ -1.86
PTPN3P26045 AC011451.2-201ENST00000604303 598 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AC106900.2-201ENST00000604994 317 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 U3.45-201ENST00000607547 219 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AC068831.7-201ENST00000616954 363 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AC006133.1-201ENST00000617106 264 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AC002076.2-201ENST00000617362 122 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 AC002550.2-201ENST00000621246 394 ntBASIC3.44□□□□□ -1.86
PTPN3P26045 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTPN3P26045 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTPN3P26045 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PTPN3P26045 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN3P26045 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
PTPN3P26045 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN3P26045 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN3P26045 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN3P26045 AC006378.2-201ENST00000623178 2476 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 DEFB108F-201ENST00000344638 222 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 RNU6-660P-201ENST00000364566 109 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN3P26045 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN3P26045 RNU6-1207P-201ENST00000384343 107 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PTPN3P26045 MTCO1P17-201ENST00000411522 491 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN3P26045 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN3P26045 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN3P26045 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN3P26045 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN3P26045 BX842559.1-201ENST00000419615 532 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN3P26045 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN3P26045 HMGN2P31-201ENST00000432430 273 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
PTPN3P26045 MTND1P9-201ENST00000453775 944 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 RPL7L1P8-201ENST00000469911 741 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 AC108860.1-201ENST00000484521 383 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 AP001025.2-201ENST00000490908 477 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 AC034222.1-201ENST00000494052 532 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 OR2A20P-203ENST00000498397 1268 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 FCF1P8-201ENST00000510322 597 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 AC017037.2-201ENST00000513850 890 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 RNU6-759P-201ENST00000516740 103 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 DEFB108D-201ENST00000527787 222 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN3P26045 AC007458.1-201ENST00000542812 373 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN3P26045 AC055876.1-202ENST00000567053 138 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN3P26045 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.43□□□□□ -1.86
PTPN3P26045 BCRP9-201ENST00000605312 388 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 AC097468.3-201ENST00000607956 456 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.43□□□□□ -1.86
PTPN3P26045 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.43□□□□□ -1.86
PTPN3P26045 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN3P26045 CUL1P1-201ENST00000509510 2425 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 MTCO1P9-201ENST00000505577 1534 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 CR383658.2-201ENST00000547576 1525 ntBASIC3.43□□□□□ -1.86
PTPN3P26045 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTPN3P26045 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PTPN3P26045 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN3P26045 AC009812.4-201ENST00000569134 1805 ntBASIC3.42□□□□□ -1.86
PTPN3P26045 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTPN3P26045 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTPN3P26045 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTPN3P26045 RNU6-769P-201ENST00000384407 104 ntBASIC3.42□□□□□ -1.86
PTPN3P26045 RNA5SP31-201ENST00000411144 127 ntBASIC3.42□□□□□ -1.86
PTPN3P26045 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.42□□□□□ -1.86
PTPN3P26045 HMGB1P11-201ENST00000413899 637 ntBASIC3.42□□□□□ -1.86
PTPN3P26045 SSXP9-201ENST00000417503 292 ntBASIC3.42□□□□□ -1.86
PTPN3P26045 UBE2D3P2-201ENST00000424409 445 ntBASIC3.42□□□□□ -1.86
PTPN3P26045 AC233728.2-201ENST00000425348 757 ntBASIC3.42□□□□□ -1.86
PTPN3P26045 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms