Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.58□□□□□ -1.68
ATF4P18848 RPL35AP31-201ENST00000418340 337 ntBASIC4.58□□□□□ -1.68
ATF4P18848 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.58□□□□□ -1.68
ATF4P18848 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.58□□□□□ -1.68
ATF4P18848 TOMM20P4-201ENST00000427861 435 ntBASIC4.58□□□□□ -1.68
ATF4P18848 NDUFB4P6-201ENST00000436819 366 ntBASIC4.58□□□□□ -1.68
ATF4P18848 HMGN1P2-201ENST00000445197 310 ntBASIC4.58□□□□□ -1.68
ATF4P18848 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.58□□□□□ -1.68
ATF4P18848 RNU1-88P-201ENST00000459274 128 ntBASIC4.58□□□□□ -1.68
ATF4P18848 AC130509.1-201ENST00000464158 433 ntBASIC4.58□□□□□ -1.68
ATF4P18848 RN7SL799P-201ENST00000475891 298 ntBASIC4.58□□□□□ -1.68
ATF4P18848 RNA5SP165-201ENST00000517142 115 ntBASIC4.58□□□□□ -1.68
ATF4P18848 FAU-203ENST00000525297 355 ntTSL 5 BASIC4.58□□□□□ -1.68
ATF4P18848 AC027369.5-201ENST00000533838 755 ntBASIC4.58□□□□□ -1.68
ATF4P18848 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.58□□□□□ -1.68
ATF4P18848 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.58□□□□□ -1.68
ATF4P18848 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.58□□□□□ -1.68
ATF4P18848 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.58□□□□□ -1.68
ATF4P18848 AL670379.10-201ENST00000604330 253 ntBASIC4.58□□□□□ -1.68
ATF4P18848 AL670379.9-201ENST00000605428 253 ntBASIC4.58□□□□□ -1.68
ATF4P18848 RNU6-85P-201ENST00000605989 107 ntBASIC4.58□□□□□ -1.68
ATF4P18848 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.58□□□□□ -1.68
ATF4P18848 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.58□□□□□ -1.68
ATF4P18848 AL359757.2-201ENST00000624309 274 ntBASIC4.58□□□□□ -1.68
ATF4P18848 AC048347.1-201ENST00000624621 427 ntBASIC4.58□□□□□ -1.68
ATF4P18848 AC073488.3-201ENST00000631611 778 ntBASIC4.58□□□□□ -1.68
ATF4P18848 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATF4P18848 FAM35BP-202ENST00000497389 3337 ntBASIC4.58□□□□□ -1.68
ATF4P18848 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATF4P18848 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATF4P18848 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.58□□□□□ -1.68
ATF4P18848 AL049641.1-201ENST00000441055 1948 ntBASIC4.58□□□□□ -1.68
ATF4P18848 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ATF4P18848 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATF4P18848 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
ATF4P18848 MAPK10-286ENST00000641208 8747 ntBASIC4.57□□□□□ -1.68
ATF4P18848 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
ATF4P18848 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.57□□□□□ -1.68
ATF4P18848 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATF4P18848 EOGT-210ENST00000615922 1931 ntBASIC4.57□□□□□ -1.68
ATF4P18848 Y_RNA.324-201ENST00000365165 102 ntBASIC4.57□□□□□ -1.68
ATF4P18848 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
ATF4P18848 RNU6-1227P-201ENST00000383981 107 ntBASIC4.57□□□□□ -1.68
ATF4P18848 RNU6-601P-201ENST00000384540 107 ntBASIC4.57□□□□□ -1.68
ATF4P18848 MTCYBP4-201ENST00000401524 249 ntBASIC4.57□□□□□ -1.68
ATF4P18848 GCNT1P4-201ENST00000404096 329 ntBASIC4.57□□□□□ -1.68
ATF4P18848 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.57□□□□□ -1.68
ATF4P18848 U3.35-201ENST00000408405 208 ntBASIC4.57□□□□□ -1.68
ATF4P18848 PNKDP1-201ENST00000435914 430 ntBASIC4.57□□□□□ -1.68
ATF4P18848 PRPF38AP2-201ENST00000438179 851 ntBASIC4.57□□□□□ -1.68
ATF4P18848 LINC02210-201ENST00000444561 288 ntBASIC4.57□□□□□ -1.68
ATF4P18848 AC091180.1-201ENST00000462104 372 ntBASIC4.57□□□□□ -1.68
ATF4P18848 RPS23P3-201ENST00000470993 430 ntBASIC4.57□□□□□ -1.68
ATF4P18848 RPL21P13-201ENST00000488305 481 ntBASIC4.57□□□□□ -1.68
ATF4P18848 AC096745.1-201ENST00000509945 370 ntBASIC4.57□□□□□ -1.68
ATF4P18848 RNU6-1282P-201ENST00000516735 96 ntBASIC4.57□□□□□ -1.68
ATF4P18848 Y_RNA.718-201ENST00000517110 102 ntBASIC4.57□□□□□ -1.68
ATF4P18848 RNU1-54P-201ENST00000517181 120 ntBASIC4.57□□□□□ -1.68
ATF4P18848 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.57□□□□□ -1.68
ATF4P18848 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.57□□□□□ -1.68
ATF4P18848 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATF4P18848 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.57□□□□□ -1.68
ATF4P18848 OR1M4P-201ENST00000589199 287 ntBASIC4.57□□□□□ -1.68
ATF4P18848 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.57□□□□□ -1.68
ATF4P18848 AL158196.1-201ENST00000616786 434 ntBASIC4.57□□□□□ -1.68
ATF4P18848 RMST_4.1-201ENST00000616886 107 ntBASIC4.57□□□□□ -1.68
ATF4P18848 MTND4LP32-201ENST00000636111 270 ntBASIC4.57□□□□□ -1.68
ATF4P18848 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATF4P18848 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
ATF4P18848 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
ATF4P18848 AC018529.3-201ENST00000624212 2254 ntBASIC4.57□□□□□ -1.68
ATF4P18848 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATF4P18848 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ATF4P18848 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.57□□□□□ -1.68
ATF4P18848 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
ATF4P18848 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
ATF4P18848 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATF4P18848 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.56□□□□□ -1.68
ATF4P18848 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATF4P18848 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ATF4P18848 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.56□□□□□ -1.68
ATF4P18848 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
ATF4P18848 MIR325-201ENST00000385260 98 ntBASIC4.56□□□□□ -1.68
ATF4P18848 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.56□□□□□ -1.68
ATF4P18848 RNU4-14P-201ENST00000410858 122 ntBASIC4.56□□□□□ -1.68
ATF4P18848 RNU6-293P-201ENST00000411259 106 ntBASIC4.56□□□□□ -1.68
ATF4P18848 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.56□□□□□ -1.68
ATF4P18848 E2F6P2-201ENST00000420708 748 ntBASIC4.56□□□□□ -1.68
ATF4P18848 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.56□□□□□ -1.68
ATF4P18848 TMEM167AP1-201ENST00000423409 219 ntBASIC4.56□□□□□ -1.68
ATF4P18848 UBE2V1P4-201ENST00000425374 344 ntBASIC4.56□□□□□ -1.68
ATF4P18848 AC130360.1-201ENST00000425489 1117 ntBASIC4.56□□□□□ -1.68
ATF4P18848 AC099677.3-201ENST00000427081 395 ntBASIC4.56□□□□□ -1.68
ATF4P18848 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.56□□□□□ -1.68
ATF4P18848 HMGB1P9-201ENST00000429856 646 ntBASIC4.56□□□□□ -1.68
ATF4P18848 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.56□□□□□ -1.68
ATF4P18848 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.56□□□□□ -1.68
ATF4P18848 AL512844.2-201ENST00000433990 593 ntBASIC4.56□□□□□ -1.68
ATF4P18848 AC092573.2-201ENST00000434546 243 ntBASIC4.56□□□□□ -1.68
ATF4P18848 NDUFB4P8-201ENST00000435351 367 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms