Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 OR5H6-203ENST00000642105 978 ntBASIC3.88□□□□□ -1.79
MSI1O43347 BDP1P-201ENST00000582658 1990 ntBASIC3.88□□□□□ -1.79
MSI1O43347 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
MSI1O43347 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MSI1O43347 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MSI1O43347 MTCO1P24-201ENST00000515438 1558 ntBASIC3.88□□□□□ -1.79
MSI1O43347 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
MSI1O43347 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MSI1O43347 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
MSI1O43347 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MSI1O43347 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MSI1O43347 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
MSI1O43347 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.87□□□□□ -1.79
MSI1O43347 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MSI1O43347 SNORA73.2-201ENST00000364946 201 ntBASIC3.87□□□□□ -1.79
MSI1O43347 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
MSI1O43347 RPL21P17-201ENST00000397467 475 ntBASIC3.87□□□□□ -1.79
MSI1O43347 HLFP1-201ENST00000402375 499 ntBASIC3.87□□□□□ -1.79
MSI1O43347 MIR1250-201ENST00000408098 113 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AL035423.1-201ENST00000420331 213 ntBASIC3.87□□□□□ -1.79
MSI1O43347 ISCA1P6-201ENST00000427740 390 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.87□□□□□ -1.79
MSI1O43347 AL358934.1-201ENST00000432346 324 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.87□□□□□ -1.79
MSI1O43347 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MSI1O43347 MTATP6P13-201ENST00000438531 667 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AC108734.1-201ENST00000439549 399 ntBASIC3.87□□□□□ -1.79
MSI1O43347 RABEPKP1-201ENST00000440529 1026 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AC079448.1-201ENST00000449377 373 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.87□□□□□ -1.79
MSI1O43347 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.87□□□□□ -1.79
MSI1O43347 RPL7P15-201ENST00000461190 712 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AC126182.1-201ENST00000478134 357 ntBASIC3.87□□□□□ -1.79
MSI1O43347 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.87□□□□□ -1.79
MSI1O43347 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.87□□□□□ -1.79
MSI1O43347 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.87□□□□□ -1.79
MSI1O43347 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.87□□□□□ -1.79
MSI1O43347 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.87□□□□□ -1.79
MSI1O43347 AC011352.1-201ENST00000512300 793 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.87□□□□□ -1.79
MSI1O43347 AC022483.1-201ENST00000514020 567 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.87□□□□□ -1.79
MSI1O43347 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.87□□□□□ -1.79
MSI1O43347 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
MSI1O43347 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.87□□□□□ -1.79
MSI1O43347 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.87□□□□□ -1.79
MSI1O43347 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.87□□□□□ -1.79
MSI1O43347 CENPUP2-201ENST00000555897 1186 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AC136619.2-201ENST00000563361 631 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AL356432.3-201ENST00000568952 465 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.87□□□□□ -1.79
MSI1O43347 AL022154.1-201ENST00000604698 785 ntBASIC3.87□□□□□ -1.79
MSI1O43347 RNU6-87P-201ENST00000607561 108 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.87□□□□□ -1.79
MSI1O43347 AC072046.2-201ENST00000618366 268 ntBASIC3.87□□□□□ -1.79
MSI1O43347 U7.8-201ENST00000619968 63 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AL732618.1-201ENST00000623251 301 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AP006248.2-201ENST00000623309 592 ntBASIC3.87□□□□□ -1.79
MSI1O43347 AC068880.5-201ENST00000624331 290 ntBASIC3.87□□□□□ -1.79
MSI1O43347 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MSI1O43347 AC010149.2-201ENST00000637608 315 ntBASIC3.87□□□□□ -1.79
MSI1O43347 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MSI1O43347 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
MSI1O43347 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MSI1O43347 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MSI1O43347 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.86□□□□□ -1.79
MSI1O43347 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
MSI1O43347 NMD3P1-201ENST00000439704 1488 ntBASIC3.86□□□□□ -1.79
MSI1O43347 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
MSI1O43347 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.86□□□□□ -1.79
MSI1O43347 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.86□□□□□ -1.79
MSI1O43347 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
MSI1O43347 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
MSI1O43347 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.86□□□□□ -1.79
MSI1O43347 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
MSI1O43347 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
MSI1O43347 OR5J1P-201ENST00000313544 939 ntBASIC3.86□□□□□ -1.79
MSI1O43347 RNA5SP51-201ENST00000364750 119 ntBASIC3.86□□□□□ -1.79
MSI1O43347 SNORA5A-201ENST00000384111 134 ntBASIC3.86□□□□□ -1.79
MSI1O43347 U3.20-201ENST00000390909 217 ntBASIC3.86□□□□□ -1.79
MSI1O43347 RNA5SP424-201ENST00000390988 115 ntBASIC3.86□□□□□ -1.79
MSI1O43347 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
MSI1O43347 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.86□□□□□ -1.79
MSI1O43347 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.86□□□□□ -1.79
MSI1O43347 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.86□□□□□ -1.79
MSI1O43347 CKS1BP5-201ENST00000434172 273 ntBASIC3.86□□□□□ -1.79
MSI1O43347 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.86□□□□□ -1.79
MSI1O43347 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.86□□□□□ -1.79
MSI1O43347 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.86□□□□□ -1.79
MSI1O43347 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.86□□□□□ -1.79
MSI1O43347 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.86□□□□□ -1.79
MSI1O43347 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.86□□□□□ -1.79
MSI1O43347 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.86□□□□□ -1.79
MSI1O43347 RPL7L1P8-201ENST00000469911 741 ntBASIC3.86□□□□□ -1.79
MSI1O43347 RPS3AP17-201ENST00000472594 777 ntBASIC3.86□□□□□ -1.79
MSI1O43347 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.86□□□□□ -1.79
MSI1O43347 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
MSI1O43347 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.86□□□□□ -1.79
MSI1O43347 AC108078.1-201ENST00000508073 725 ntBASIC3.86□□□□□ -1.79
MSI1O43347 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms