Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 NOL8P1-201ENST00000508336 3529 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 AC006020.1-201ENST00000420179 1854 ntBASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.9□□□□□ -1.79
MBD3L4A6NDZ8 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 OR4G2P-202ENST00000641004 1759 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 AL731532.2-201ENST00000623542 1953 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 MIR383-201ENST00000362257 73 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 SNORA24.1-201ENST00000384401 135 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 MIR23A-201ENST00000385245 73 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 SNORD37.1-201ENST00000390968 65 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 RNU6-908P-201ENST00000410160 94 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 SNORA74C-2-201ENST00000411179 201 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 AL139413.1-201ENST00000421309 217 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 RPL23AP52-201ENST00000439311 478 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 NEFMP1-201ENST00000443423 1006 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 AL031584.1-201ENST00000447169 754 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 FABP5P13-201ENST00000452144 328 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 CACYBPP2-201ENST00000453625 678 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 RPL7P19-201ENST00000469948 618 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 AC108475.1-201ENST00000507880 950 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 AC108078.2-201ENST00000510750 236 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 RNA5SP401-201ENST00000515920 127 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 RNA5SP446-201ENST00000515955 82 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 RNU2-58P-201ENST00000516403 183 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 RNU6-835P-201ENST00000516974 104 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 AC025884.1-201ENST00000556034 378 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 MIR548S-201ENST00000581352 82 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 BDH2P1-201ENST00000602288 736 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 RNF138P2-201ENST00000603490 592 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 AL020991.1-201ENST00000612314 373 ntBASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MBD3L4A6NDZ8 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 AL158163.1-201ENST00000603915 1649 ntBASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 SNORA31-201ENST00000362607 130 ntBASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 Y_RNA.255-201ENST00000364581 97 ntBASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 RNU6-1029P-201ENST00000384109 107 ntBASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 RN7SKP140-201ENST00000411196 284 ntBASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 RPL36AP10-201ENST00000421785 322 ntBASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 MTCYBP8-201ENST00000422855 651 ntBASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 VDAC1P3-201ENST00000434069 851 ntBASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 AC020550.1-201ENST00000447385 163 ntBASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 RN7SL691P-201ENST00000494487 301 ntBASIC3.88□□□□□ -1.79
MBD3L4A6NDZ8 PCBP2P3-201ENST00000509726 843 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms