Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 SNORD73A-201ENST00000386062 65 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 HSPA8P15-201ENST00000401676 786 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 RNU2-21P-201ENST00000410368 188 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 RNU6-130P-201ENST00000411112 103 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 AC096920.1-201ENST00000423991 241 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 DAP3P1-201ENST00000441522 278 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 FHP1-201ENST00000442741 703 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 TMSB4XP3-201ENST00000445144 114 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 AL354710.1-201ENST00000453641 246 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 OR2AO1P-201ENST00000476497 403 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 AC016065.2-201ENST00000514530 444 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 ERHP1-201ENST00000523006 310 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 EIF4A2P5-201ENST00000529914 499 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 NF1P5-201ENST00000588287 448 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 AC006363.1-201ENST00000603806 463 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 AL160281.1-201ENST00000605307 311 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 AL591516.1-201ENST00000611326 274 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 AC092079.1-201ENST00000558620 1985 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 OR9K1P-202ENST00000641111 3217 ntBASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGC4Q9Y5F7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 SAMMSON-213ENST00000641336 1521 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 RN7SKP145-201ENST00000363291 303 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 Y_RNA.480-201ENST00000384364 102 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 MIR215-201ENST00000384858 110 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 MIR628-201ENST00000385229 95 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 Y_RNA.793-201ENST00000411222 111 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 AL030996.1-201ENST00000411430 235 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 AL139156.1-201ENST00000412785 841 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 BX276092.6-201ENST00000430476 250 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 RPL23AP25-201ENST00000430973 463 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 CEACAMP1-201ENST00000434624 1035 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 AC098831.1-201ENST00000440661 216 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 RPEP5-201ENST00000441137 268 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 AC008264.1-201ENST00000447612 367 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 AL162389.1-201ENST00000449233 177 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 BX276092.8-201ENST00000455722 250 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 RPL31P60-201ENST00000478450 367 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 ACA59.1-201ENST00000515966 143 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 RNU6-1212P-201ENST00000517023 104 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 RNA5SP373-201ENST00000517271 95 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 AC069113.1-201ENST00000517763 267 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 AP006587.4-201ENST00000526053 529 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 OR1F2P-201ENST00000570470 933 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 AL450472.1-202ENST00000637286 180 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 AC074101.1-201ENST00000637861 241 ntBASIC5.4□□□□□ -1.54
PCDHGC4Q9Y5F7 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGC4Q9Y5F7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
PCDHGC4Q9Y5F7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGC4Q9Y5F7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
PCDHGC4Q9Y5F7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGC4Q9Y5F7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
PCDHGC4Q9Y5F7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGC4Q9Y5F7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGC4Q9Y5F7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGC4Q9Y5F7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 GVINP1-202ENST00000531871 7271 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms