Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNU6-193P-201ENST00000410977 107 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 OR6C66P-201ENST00000414917 930 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.27□□□□□ -1.57
DDX41Q9UJV9 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.27□□□□□ -1.57
DDX41Q9UJV9 RPL7P12-201ENST00000446719 750 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 RPL5P30-201ENST00000465511 891 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 RPL7L1P8-201ENST00000469911 741 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.27□□□□□ -1.57
DDX41Q9UJV9 AC007016.1-201ENST00000512110 244 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 AC243972.3-201ENST00000539655 198 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 AL138976.2-201ENST00000563989 694 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.27□□□□□ -1.57
DDX41Q9UJV9 AC087045.1-201ENST00000605856 382 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 AL450472.3-201ENST00000615578 367 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 AC110801.1-201ENST00000623590 212 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 AL359697.1-201ENST00000624879 587 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
DDX41Q9UJV9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
DDX41Q9UJV9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
DDX41Q9UJV9 AL359922.3-201ENST00000624779 1670 ntBASIC5.27□□□□□ -1.57
DDX41Q9UJV9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
DDX41Q9UJV9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 XIAPP3-201ENST00000312918 795 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 AC067945.1-201ENST00000342609 618 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 MIR448-201ENST00000362131 111 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 Y_RNA.356-201ENST00000365475 113 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 RNU6-510P-201ENST00000391239 108 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 AL162578.1-201ENST00000406202 378 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 AL606923.1-201ENST00000406616 190 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 RPL35AP12-201ENST00000425362 338 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 SRIP2-201ENST00000428470 166 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 RPL23AP55-201ENST00000498163 452 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 AC091885.1-201ENST00000506658 268 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 RNU6-390P-201ENST00000516259 103 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 RN7SKP219-201ENST00000516825 296 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 OR5B19P-201ENST00000531766 928 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 OR5B10P-201ENST00000532869 642 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 AC069240.1-201ENST00000548774 375 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 AC125611.2-201ENST00000551907 647 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 MTND6P33-201ENST00000571794 183 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 AL136221.1-201ENST00000621449 509 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 AC025034.2-201ENST00000623264 286 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 AC067931.1-201ENST00000624190 671 ntBASIC5.26□□□□□ -1.57
DDX41Q9UJV9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
DDX41Q9UJV9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 RAD17P1-201ENST00000418130 2042 ntBASIC5.25□□□□□ -1.57
DDX41Q9UJV9 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 AC021146.4-201ENST00000309229 279 ntBASIC5.25□□□□□ -1.57
DDX41Q9UJV9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 RNA5SP52-201ENST00000362448 134 ntBASIC5.25□□□□□ -1.57
DDX41Q9UJV9 SNORA23-201ENST00000365128 182 ntBASIC5.25□□□□□ -1.57
DDX41Q9UJV9 RNU6-1029P-201ENST00000384109 107 ntBASIC5.25□□□□□ -1.57
DDX41Q9UJV9 TXNP7-201ENST00000406296 293 ntBASIC5.25□□□□□ -1.57
DDX41Q9UJV9 RNU6-387P-201ENST00000411331 105 ntBASIC5.25□□□□□ -1.57
DDX41Q9UJV9 AC069285.2-201ENST00000440210 275 ntBASIC5.25□□□□□ -1.57
DDX41Q9UJV9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 RN7SL41P-201ENST00000476144 297 ntBASIC5.25□□□□□ -1.57
DDX41Q9UJV9 AC068587.1-201ENST00000483613 781 ntBASIC5.25□□□□□ -1.57
DDX41Q9UJV9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
DDX41Q9UJV9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms