Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AL021997.2-201ENST00000615674 271 ntBASIC4.61□□□□□ -1.67
TLR9Q9NR96 MIR1302-1-201ENST00000637932 143 ntBASIC4.61□□□□□ -1.67
TLR9Q9NR96 AL596275.2-204ENST00000641628 552 ntBASIC4.61□□□□□ -1.67
TLR9Q9NR96 AL596275.2-206ENST00000641957 626 ntBASIC4.61□□□□□ -1.67
TLR9Q9NR96 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TLR9Q9NR96 NXPH1-205ENST00000602349 1953 ntBASIC4.61□□□□□ -1.67
TLR9Q9NR96 AL451142.2-201ENST00000429076 2090 ntBASIC4.61□□□□□ -1.67
TLR9Q9NR96 AL133243.3-201ENST00000617415 3004 ntBASIC4.61□□□□□ -1.67
TLR9Q9NR96 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
TLR9Q9NR96 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.61□□□□□ -1.67
TLR9Q9NR96 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TLR9Q9NR96 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.6□□□□□ -1.67
TLR9Q9NR96 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.6□□□□□ -1.67
TLR9Q9NR96 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
TLR9Q9NR96 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TLR9Q9NR96 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.6□□□□□ -1.67
TLR9Q9NR96 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.6□□□□□ -1.67
TLR9Q9NR96 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TLR9Q9NR96 MAPK10-286ENST00000641208 8747 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TLR9Q9NR96 Y_RNA.67-201ENST00000362870 100 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 RNA5SP175-201ENST00000364275 119 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 RNU6-456P-201ENST00000384493 107 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 RNU6-146P-201ENST00000384602 108 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 RN7SKP235-201ENST00000410662 305 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 RPS15AP40-201ENST00000419621 391 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 AL353678.1-201ENST00000422735 741 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 MTCO3P46-201ENST00000425787 232 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 EZH2P1-201ENST00000431167 291 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.6□□□□□ -1.67
TLR9Q9NR96 AC016691.1-201ENST00000441321 413 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 HMGB3P9-201ENST00000441799 583 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 GEMIN8P3-201ENST00000445417 720 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.6□□□□□ -1.67
TLR9Q9NR96 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.6□□□□□ -1.67
TLR9Q9NR96 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TLR9Q9NR96 RNU6-261P-201ENST00000459506 102 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 MTCO2P29-201ENST00000465212 189 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 RPS3AP50-201ENST00000487064 803 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.6□□□□□ -1.67
TLR9Q9NR96 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.6□□□□□ -1.67
TLR9Q9NR96 AC099522.1-202ENST00000514718 367 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 SNORA40.12-201ENST00000516329 111 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.6□□□□□ -1.67
TLR9Q9NR96 AP003072.2-201ENST00000527756 676 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 PSMA3P-201ENST00000555485 635 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.6□□□□□ -1.67
TLR9Q9NR96 AL354984.3-201ENST00000604803 325 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 DISC2.1-201ENST00000612827 205 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.6□□□□□ -1.67
TLR9Q9NR96 AC079597.1-201ENST00000624306 508 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TLR9Q9NR96 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TLR9Q9NR96 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TLR9Q9NR96 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.6□□□□□ -1.67
TLR9Q9NR96 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TLR9Q9NR96 MAPK10-320ENST00000641462 6696 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 RLIMP1-201ENST00000339626 1680 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TLR9Q9NR96 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TLR9Q9NR96 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
TLR9Q9NR96 AC093535.2-201ENST00000624769 2326 ntBASIC4.6□□□□□ -1.67
TLR9Q9NR96 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TLR9Q9NR96 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TLR9Q9NR96 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
TLR9Q9NR96 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
TLR9Q9NR96 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TLR9Q9NR96 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TLR9Q9NR96 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
TLR9Q9NR96 Y_RNA.111-201ENST00000363248 100 ntBASIC4.59□□□□□ -1.67
TLR9Q9NR96 RNU6-97P-201ENST00000363387 104 ntBASIC4.59□□□□□ -1.67
TLR9Q9NR96 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
TLR9Q9NR96 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TLR9Q9NR96 SNORA20.2-201ENST00000383922 131 ntBASIC4.59□□□□□ -1.67
TLR9Q9NR96 U3.20-201ENST00000390909 217 ntBASIC4.59□□□□□ -1.67
TLR9Q9NR96 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TLR9Q9NR96 AC097374.1-203ENST00000400783 485 ntBASIC4.59□□□□□ -1.67
TLR9Q9NR96 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TLR9Q9NR96 RNU6-373P-201ENST00000411247 98 ntBASIC4.59□□□□□ -1.67
TLR9Q9NR96 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.59□□□□□ -1.67
TLR9Q9NR96 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.59□□□□□ -1.67
TLR9Q9NR96 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.59□□□□□ -1.67
TLR9Q9NR96 AL445584.1-201ENST00000431451 330 ntBASIC4.59□□□□□ -1.67
TLR9Q9NR96 AL356276.2-201ENST00000435919 558 ntBASIC4.59□□□□□ -1.67
TLR9Q9NR96 RPS15AP9-201ENST00000439856 381 ntBASIC4.59□□□□□ -1.67
TLR9Q9NR96 RPS26P2-201ENST00000440331 348 ntBASIC4.59□□□□□ -1.67
TLR9Q9NR96 USP9YP15-201ENST00000442391 422 ntBASIC4.59□□□□□ -1.67
TLR9Q9NR96 AC055855.1-201ENST00000489563 579 ntBASIC4.59□□□□□ -1.67
TLR9Q9NR96 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.59□□□□□ -1.67
TLR9Q9NR96 RNU6-327P-201ENST00000516270 127 ntBASIC4.59□□□□□ -1.67
TLR9Q9NR96 RNU6-1045P-201ENST00000516321 107 ntBASIC4.59□□□□□ -1.67
TLR9Q9NR96 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.59□□□□□ -1.67
TLR9Q9NR96 AP000907.2-201ENST00000530827 353 ntBASIC4.59□□□□□ -1.67
TLR9Q9NR96 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.59□□□□□ -1.67
TLR9Q9NR96 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.59□□□□□ -1.67
TLR9Q9NR96 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.59□□□□□ -1.67
TLR9Q9NR96 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.59□□□□□ -1.67
TLR9Q9NR96 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.59□□□□□ -1.67
TLR9Q9NR96 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 272.6 ms