Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 BMI1P1-201ENST00000445879 941 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 MTCO1P27-201ENST00000448269 226 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 SNORA59A-201ENST00000459326 152 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 RPL30P9-201ENST00000465586 330 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 RPL31P50-201ENST00000471002 296 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 AC024909.2-201ENST00000553035 286 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 ROCK1P1-201ENST00000573767 549 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 AC090616.5-202ENST00000582111 297 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 AC040904.1-201ENST00000590850 223 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 BBIP1P1-201ENST00000602999 279 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 AC107214.2-201ENST00000608204 634 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 RNVU1-4-201ENST00000612985 164 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 AC100793.4-201ENST00000613683 429 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 AC092140.2-201ENST00000618027 521 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 AL359715.5-201ENST00000623431 443 ntBASIC3.9□□□□□ -1.79
DDX4Q9NQI0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
DDX4Q9NQI0 AL359893.1-201ENST00000447628 1580 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 RNU4-91P-201ENST00000364778 135 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 RNU6-339P-201ENST00000384310 107 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 RNU6-952P-201ENST00000391164 108 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AL136116.1-201ENST00000403591 381 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 MIR1305-201ENST00000408300 86 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AMD1P2-201ENST00000412936 992 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AL353678.1-201ENST00000422735 741 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 RPS27AP14-201ENST00000422868 454 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 MTCO2P16-201ENST00000436962 677 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 MTCO2P7-201ENST00000446518 666 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AC008264.1-201ENST00000447612 367 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 MTCO3P20-201ENST00000454926 688 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 MTCO2P18-201ENST00000457151 658 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AC109925.1-201ENST00000478069 331 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 OR2A20P-203ENST00000498397 1268 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AC020893.1-201ENST00000502452 580 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AC022447.3-201ENST00000506865 495 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AC010625.1-201ENST00000511296 403 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 Y_RNA.695-201ENST00000516715 107 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 OR6C7P-201ENST00000547875 934 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AL121603.1-201ENST00000553815 142 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 EIF4BP1-201ENST00000554881 351 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 MIR2682-201ENST00000580305 110 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 U6.98-201ENST00000637157 84 ntBASIC3.89□□□□□ -1.79
DDX4Q9NQI0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
DDX4Q9NQI0 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 RNU4-21P-201ENST00000362802 126 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 Y_RNA.111-201ENST00000363248 100 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 RNU4-24P-201ENST00000364565 139 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 SNORA51.2-201ENST00000364595 132 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 MIR634-201ENST00000385208 97 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 MIR607-201ENST00000385241 96 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 MT-TC-201ENST00000387405 66 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
DDX4Q9NQI0 UBA52P6-201ENST00000399822 382 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 MTND4LP20-201ENST00000402379 270 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 RNA5SP229-201ENST00000410809 99 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AC126124.2-201ENST00000413542 321 ntBASIC3.88□□□□□ -1.79
DDX4Q9NQI0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms