Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC125611.2-201ENST00000551907 647 ntBASIC3.22□□□□□ -1.89
UBQLN3Q9H347 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UBQLN3Q9H347 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.22□□□□□ -1.89
UBQLN3Q9H347 AC012435.1-202ENST00000568772 240 ntBASIC3.22□□□□□ -1.89
UBQLN3Q9H347 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
UBQLN3Q9H347 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.22□□□□□ -1.89
UBQLN3Q9H347 AL450472.3-201ENST00000615578 367 ntBASIC3.22□□□□□ -1.89
UBQLN3Q9H347 AC006111.3-201ENST00000622137 383 ntBASIC3.22□□□□□ -1.89
UBQLN3Q9H347 AC008443.7-201ENST00000622195 246 ntBASIC3.22□□□□□ -1.89
UBQLN3Q9H347 AL357559.1-201ENST00000622228 274 ntBASIC3.22□□□□□ -1.89
UBQLN3Q9H347 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.22□□□□□ -1.89
UBQLN3Q9H347 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
UBQLN3Q9H347 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UBQLN3Q9H347 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
UBQLN3Q9H347 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 RNU6-1078P-201ENST00000364522 103 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 RNU6-660P-201ENST00000364566 109 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 RPS3AP24-201ENST00000407896 734 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 RN7SKP266-201ENST00000410232 287 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC233728.2-201ENST00000425348 757 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AP000907.1-201ENST00000428428 510 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 UBE2V1P13-201ENST00000436983 439 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC091862.1-201ENST00000438016 1100 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AL357552.1-201ENST00000445254 415 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 PRDX3P3-201ENST00000447765 522 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 RNA5SP310-201ENST00000459084 116 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 RN7SL330P-201ENST00000469709 307 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 RN7SL594P-201ENST00000470590 287 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC023598.1-201ENST00000472521 361 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC108860.1-201ENST00000484521 383 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC034222.1-201ENST00000494052 532 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC026801.2-201ENST00000515352 425 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AP003497.1-201ENST00000528472 562 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AP004247.1-201ENST00000531556 1289 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC007458.1-201ENST00000542812 373 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 MTND3P12-201ENST00000559068 328 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AL357094.1-201ENST00000603845 844 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 ELOCP35-201ENST00000604289 336 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC107214.2-201ENST00000608204 634 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AP002826.1-201ENST00000608835 315 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC012314.7-201ENST00000619693 93 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC244100.1-202ENST00000621554 382 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC004777.1-201ENST00000624317 287 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC079416.3-201ENST00000624479 549 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
UBQLN3Q9H347 AC090740.1-201ENST00000623193 2262 ntBASIC3.21□□□□□ -1.9
UBQLN3Q9H347 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 CUL1P1-201ENST00000509510 2425 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 AP002088.1-201ENST00000382740 395 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 MIR493-201ENST00000385254 89 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 RNU1-101P-201ENST00000391171 127 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 RNU6-1077P-201ENST00000410506 102 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 MTCYBP39-201ENST00000437562 491 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 OR6K1P-201ENST00000456766 971 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 RNU7-125P-201ENST00000458760 62 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 AC010401.1-201ENST00000463867 348 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 RPS3AP22-201ENST00000488297 769 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 AP000563.1-201ENST00000490865 758 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 AC022447.3-201ENST00000506865 495 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 AC068587.4-201ENST00000533893 186 ntBASIC3.2□□□□□ -1.9
UBQLN3Q9H347 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.2□□□□□ -1.9
UBQLN3Q9H347 AC008015.1-201ENST00000555505 465 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms