Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL162395.1-201ENST00000457882 422 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AC079804.1-201ENST00000461922 436 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 RN7SL817P-201ENST00000480777 288 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 RN7SL244P-201ENST00000493405 297 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AC021146.3-201ENST00000511911 260 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 RNU6-1038P-201ENST00000516516 104 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 HMGB1P19-201ENST00000517578 577 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AC022882.1-201ENST00000532142 501 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AC063950.1-201ENST00000552036 308 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AC100830.2-201ENST00000581636 240 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AC113194.1-201ENST00000606037 500 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AC011155.2-201ENST00000623202 216 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 BMS1P21-201ENST00000634565 365 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 OR51H2P-202ENST00000641424 3046 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AC244517.1-201ENST00000606030 2086 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AC108751.5-201ENST00000492880 1336 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 NEAT1-202ENST00000501122 22743 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 RNU6-179P-201ENST00000363350 107 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 RNA5SP428-201ENST00000365129 132 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 MIR195-201ENST00000385194 87 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 SNORD96B-201ENST00000386148 79 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 AL356057.3-201ENST00000402607 340 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 AL357515.1-201ENST00000402967 542 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 AL080315.1-201ENST00000406055 466 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 RPL37P10-201ENST00000412884 288 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 RPL6P29-201ENST00000414863 865 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 AC068533.1-201ENST00000418542 415 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 RPL36AP6-201ENST00000435770 321 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 AL137792.2-201ENST00000443484 235 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 RPL21P133-201ENST00000443666 476 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 AC016696.1-201ENST00000446949 318 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 HMGB3P22-202ENST00000451823 572 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 AC022034.3-201ENST00000471393 478 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 COX7A2P2-201ENST00000505291 250 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 CCDC34P1-201ENST00000507441 517 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 OR51K1P-201ENST00000510214 950 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 RNA5SP43-201ENST00000516559 110 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 Y_RNA.720-201ENST00000517166 92 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 AL133153.1-201ENST00000557756 303 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 AL390240.1-201ENST00000612950 384 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 LINC00901.1-201ENST00000617252 152 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 AC005086.4-201ENST00000623065 213 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 MAPK10-304ENST00000641341 3984 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 ZFRP1-201ENST00000457579 2970 ntBASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.94□□□□□ -1.62
FOXP3Q9BZS1 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
FOXP3Q9BZS1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
FOXP3Q9BZS1 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXP3Q9BZS1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXP3Q9BZS1 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
FOXP3Q9BZS1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXP3Q9BZS1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
FOXP3Q9BZS1 OR14L1P-202ENST00000641545 3009 ntBASIC4.93□□□□□ -1.62
FOXP3Q9BZS1 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
FOXP3Q9BZS1 AC011155.1-201ENST00000316512 456 ntBASIC4.93□□□□□ -1.62
FOXP3Q9BZS1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXP3Q9BZS1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXP3Q9BZS1 Y_RNA.28-201ENST00000362554 111 ntBASIC4.93□□□□□ -1.62
FOXP3Q9BZS1 SNORD113-7-201ENST00000363762 77 ntBASIC4.93□□□□□ -1.62
FOXP3Q9BZS1 RNU6-82P-201ENST00000363970 107 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms